RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 ATP2C1P98194 919 aaPredicted RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 ARID3BQ8IVW6 561 aaPredicted RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 NEMP1O14524 444 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 PSMC6P62333 389 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 SPANXN2Q5MJ10 180 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 DUSP10Q9Y6W6 482 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 FRMPD1Q5SYB0 1578 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 FRMPD2Q68DX3 1309 aaPredicted RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 PVALEFA0A1B0GWK0 134 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 AREL1O15033 823 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 UNC5CO95185 931 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 TMEM245Q9H330 911 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 LY9Q9HBG7 655 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 MATN2O00339 956 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 TYK2P29597 1187 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 MECOMQ03112 1051 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 NAALADL2Q58DX5 795 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 MEI1Q5TIA1 1274 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 CLEC4MQ9H2X3 399 aaPredicted RBP14.26□□□□□ -0.13
TRIO-202ENST00000344204 RARGP13631 454 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 COX4I2Q96KJ9 171 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
TRIO-202ENST00000344204 CCDC81Q6ZN84 652 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 GINS4Q9BRT9 223 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SNX13Q9Y5W8 968 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 TUBA3EQ6PEY2 450 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 OXER1Q8TDS5 423 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 EXT2Q93063 718 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 PLEKHG4BQ96PX9 1271 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 TMED5Q9Y3A6 229 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 hCG_1984214I3L0E3 225 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 RTN2O75298 545 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 ZNF713Q8N859 430 aaPredicted RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 OR6Y1Q8NGX8 325 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 UTYO14607 1347 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 PCP4L1A6NKN8 68 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 HOXC9P31274 260 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SERPINB9P50453 376 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SLC45A4Q5BKX6 768 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 LMBRD2Q68DH5 695 aaPredicted RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 KLHL41O60662 606 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 PPP1R15BQ5SWA1 713 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 ARHGEF10LQ9HCE6 1279 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SHROOM3Q8TF72 1996 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 ITKQ08881 620 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 MTHFD1LQ6UB35 978 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 CHID1Q9BWS9 393 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 BTN3A3O00478 584 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 MAB21L3Q8N8X9 362 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 NACA2Q9H009 215 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 IARS2Q9NSE4 1012 aaKnown RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 IP6K2Q9UHH9 426 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 USP17L21D6R901 530 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 TM9SF1O15321 606 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 PAMP19021 973 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 ZBTB8BQ8NAP8 495 aaPredicted RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 DEPTORQ8TB45 409 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 DDX17Q92841 729 aaKnown RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 F8W031 263 aaPredicted RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 ACAP1Q15027 740 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 RNF43Q68DV7 783 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRIO-202ENST00000344204 RAD54LQ92698 747 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 C18orf8Q96DM3 657 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 OXNAD1Q96HP4 312 aaPredicted RBP14.25□□□□□ -0.13
TRIO-202ENST00000344204 STK33Q9BYT3 514 aa14.25□□□□□ -0.13
TRIO-202ENST00000344204 LRMDAQ9H2I8 198 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 ZHX2Q9Y6X8 837 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 BAIAP3O94812 1187 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 TTC8Q8TAM2 541 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 CAPN6Q9Y6Q1 641 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 SNRPAP09012 282 aaKnown RBP14.24□□□□□ -0.13
TRIO-202ENST00000344204 CCT3P49368 545 aaKnown RBP14.24□□□□□ -0.13
TRIO-202ENST00000344204 TRIM64CA6NLI5 447 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 SLC16A3O15427 465 aaKnown RBP14.24□□□□□ -0.13
TRIO-202ENST00000344204 AKR1B1P15121 316 aa14.24□□□□□ -0.13
TRIO-202ENST00000344204 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
TRIO-202ENST00000344204 PRUNE1Q86TP1 453 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms