RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 EEF1GP26641 437 aaKnown RBP23.66■■□□□ 1.38
RBM38-201ENST00000342690 POLR2BP30876 1174 aaKnown RBP23.66■■□□□ 1.38
RBM38-201ENST00000342690 GTF2H1P32780 548 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 GLUD2P49448 558 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 MCCD1P59942 119 aaPredicted RBP23.66■■□□□ 1.38
RBM38-201ENST00000342690 BIRC3Q13489 604 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 IQCB1Q15051 598 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 PTPN14Q15678 1187 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 TCEAL5Q5H9L2 206 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 C1orf220Q5T0J3 134 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 FAM171A1Q5VUB5 890 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 CDKAL1Q5VV42 579 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 MMRN2Q9H8L6 949 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 CHST7Q9NS84 486 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 STXBP5LQ9Y2K9 1186 aa23.66■■□□□ 1.38
RBM38-201ENST00000342690 PRRC2BQ5JSZ5 2229 aaKnown RBP23.65■■□□□ 1.38
RBM38-201ENST00000342690 HIDE1A8MVS5 230 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 CXCL14O95715 111 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 URODP06132 367 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 TPM2P07951 284 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 CDK11BP21127 795 aaKnown RBP23.65■■□□□ 1.38
RBM38-201ENST00000342690 CA8P35219 290 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 AARSP49588 968 aaKnown RBP eCLIP23.65■■□□□ 1.384e-6■■■□□ 17.5
RBM38-201ENST00000342690 DSG1Q02413 1049 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 USP41Q3LFD5 358 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 TCP11X2Q5H9J9 407 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.65■■□□□ 1.38
RBM38-201ENST00000342690 TRAPPC11Q7Z392 1133 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 LUZP1Q86V48 1076 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 SLC35C1Q96A29 364 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 SUSD3Q96L08 255 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 AGAP1Q9UPQ3 857 aa23.65■■□□□ 1.38
RBM38-201ENST00000342690 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.64■■□□□ 1.37
RBM38-201ENST00000342690 C2orf71A6NGG8 1288 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 C2CD2LO14523 706 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 SPTLC1O15269 473 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 TRAPPC3O43617 180 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 KRT19P08727 400 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 FGFR3P22607 806 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 TKTP29401 623 aaKnown RBP23.64■■□□□ 1.37
RBM38-201ENST00000342690 GCLMP48507 274 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 LILRA4P59901 499 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 RTP2Q5QGT7 225 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 KIAA0319Q5VV43 1072 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 CEP57Q86XR8 500 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 MRPL43Q8N983 215 aaKnown RBP23.64■■□□□ 1.37
RBM38-201ENST00000342690 ZNF560Q96MR9 790 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 TTPALQ9BTX7 342 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 TMEM8AQ9HCN3 771 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 IRAK3Q9Y616 596 aa23.64■■□□□ 1.37
RBM38-201ENST00000342690 LILRB3O75022 631 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 N4BP1O75113 896 aaKnown RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 PRKCSHP14314 528 aaPredicted RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 TAF6P49848 677 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 MXI1P50539 228 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 RBP5P82980 135 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 PPP3CAQ08209 521 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 TRPC3Q13507 836 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 BMS1Q14692 1282 aaKnown RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 CCDC85BQ15834 202 aaPredicted RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 MAN2A1Q16706 1144 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 TDRD10Q5VZ19 366 aaKnown RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 KIAA1841Q6NSI8 718 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 TUBGCP2Q9BSJ2 902 aa23.63■■□□□ 1.37
RBM38-201ENST00000342690 MRPL17Q9NRX2 175 aaKnown RBP23.63■■□□□ 1.37
RBM38-201ENST00000342690 M0QZQ0 153 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 AFPP02771 609 aaKnown RBP23.62■■□□□ 1.37
RBM38-201ENST00000342690 C4BPAP04003 597 aaKnown RBP23.62■■□□□ 1.37
RBM38-201ENST00000342690 PIK3CAP42336 1068 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 ZACNQ401N2 412 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 KRT39Q6A163 491 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 PRSS55Q6UWB4 352 aaPredicted RBP23.62■■□□□ 1.37
RBM38-201ENST00000342690 DSTYKQ6XUX3 929 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 SV2AQ7L0J3 742 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 LRRC52Q8N7C0 313 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 MAFAQ8NHW3 353 aaPredicted RBP23.62■■□□□ 1.37
RBM38-201ENST00000342690 PPM1EQ8WY54 764 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 RIN2Q8WYP3 895 aaPredicted RBP23.62■■□□□ 1.37
RBM38-201ENST00000342690 PCDHB8Q9UN66 801 aa23.62■■□□□ 1.37
RBM38-201ENST00000342690 MYO7AQ13402 2215 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 TSC2P49815 1807 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 SYN3O14994 580 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 PER2O15055 1255 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 CST3P01034 146 aaPredicted RBP23.61■■□□□ 1.37
RBM38-201ENST00000342690 ZNF18P17022 549 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 PAX3P23760 479 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 GTF2F1P35269 517 aaKnown RBP eCLIP23.61■■□□□ 1.37
RBM38-201ENST00000342690 PNPLA4P41247 253 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 MYL7Q01449 175 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 HYAL1Q12794 435 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 KCNH2Q12809 1159 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 SV2CQ496J9 727 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 RBM23Q86U06 439 aaKnown RBP23.61■■□□□ 1.37
RBM38-201ENST00000342690 GPR65Q8IYL9 337 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 PIK3R5Q8WYR1 880 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 PPP2R3CQ969Q6 453 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 SSX2IPQ9Y2D8 614 aa23.61■■□□□ 1.37
RBM38-201ENST00000342690 PES1O00541 588 aaKnown RBP23.6■■□□□ 1.37
RBM38-201ENST00000342690 CLSTN1O94985 981 aa23.6■■□□□ 1.37
RBM38-201ENST00000342690 NRIP1P48552 1158 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms