RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 CALCOCO2Q13137 446 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 SIX1Q15475 284 aaPredicted RBP16.72■□□□□ 0.27
PDE8B-204ENST00000342343 LONRF1Q17RB8 773 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 CLEC16AQ2KHT3 1053 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 SUPT20HL1Q3ZLR7 823 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 TDRD10Q5VZ19 366 aaKnown RBP16.72■□□□□ 0.27
PDE8B-204ENST00000342343 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 O00370 1275 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 CLDN3O15551 220 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 KRT16P08779 473 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 GARTP22102 1010 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 ATP5DP30049 168 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 C15orf39Q6ZRI6 1047 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
PDE8B-204ENST00000342343 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
PDE8B-204ENST00000342343 SERPINB12Q96P63 405 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 STK38LQ9Y2H1 464 aa16.72■□□□□ 0.27
PDE8B-204ENST00000342343 ZKSCAN8Q15776 578 aaPredicted RBP16.71■□□□□ 0.27
PDE8B-204ENST00000342343 SPATA21Q7Z572 469 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 DHX37Q8IY37 1157 aaKnown RBP16.71■□□□□ 0.27
PDE8B-204ENST00000342343 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 HERPUD2Q9BSE4 406 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 RXFP1Q9HBX9 757 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 GGA3Q9NZ52 723 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 ANAPC7Q9UJX3 599 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 NFASCO94856 1347 aa16.71■□□□□ 0.27
PDE8B-204ENST00000342343 LRRIQ4A6NIV6 560 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 TTLL13PA6NNM8 815 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 GJB6O95452 261 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 VNN1O95497 513 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 HLA-DRAP01903 254 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 GLRA2P23416 452 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 RRM1P23921 792 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 MSH2P43246 934 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 OAZ1P54368 228 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 CYP1B1Q16678 543 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 XKR3Q5GH77 459 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 MIS18BP1Q6P0N0 1132 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 PASD1Q8IV76 773 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 FITM2Q8N6M3 262 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 ZNF570Q96NI8 536 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.26
PDE8B-204ENST00000342343 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.26
PDE8B-204ENST00000342343 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 BRCA1P38398 1863 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 EXTL3O43909 919 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 SKAP2O75563 359 aaPredicted RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ACSL3O95573 720 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 UNGP13051 313 aaPredicted RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 GTF2H1P32780 548 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ATP11AP98196 1134 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 SATB1Q01826 763 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 PSPC1Q8WXF1 523 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 SPDL1Q96EA4 605 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 APOBEC3GQ9HC16 384 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 SLC24A3Q9HC58 644 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 AGO2Q9UKV8 859 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 C4BPAP04003 597 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 HARSP12081 509 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 CREB1P16220 341 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 GCNT1Q02742 428 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 SNX1Q13596 522 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 GNPTABQ3T906 1256 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ZNF568Q3ZCX4 644 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ASRGL1Q7L266 308 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ANKRD42Q8N9B4 389 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 CKAP2Q8WWK9 683 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 FNBP1Q96RU3 617 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 CDC42EP4Q9H3Q1 356 aaKnown RBP16.7■□□□□ 0.26
PDE8B-204ENST00000342343 ZNF302Q9NR11 478 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
PDE8B-204ENST00000342343 MROH7Q68CQ1 1323 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 ZACNQ401N2 412 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 VSTM1Q6UX27 236 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 EEPD1Q7L9B9 569 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 MCOLN2Q8IZK6 566 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 MORC4Q8TE76 937 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 SLC5A4Q9NY91 659 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 SSC5DA1L4H1 1573 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 A8MUI8 341 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDE8B-204ENST00000342343 ECEL1O95672 775 aa16.69■□□□□ 0.26
PDE8B-204ENST00000342343 MAPK4P31152 587 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms