RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 EME1Q96AY2 570 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 TMEM121Q9BTD3 319 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 CAAP1Q9H8G2 361 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 NUDT17P0C025 328 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 SLC1A1P43005 524 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 ACOT2P49753 483 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 BTBD10Q9BSF8 475 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 KIFC3Q9BVG8 833 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 GANQ9H2C0 597 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 SOX11P35716 441 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 AQP5P55064 265 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 BLMHQ13867 455 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 EPHA7Q15375 998 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 HDAC11Q96DB2 347 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
SSX2IP-201ENST00000342203 AFF2P51816 1311 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CALCAP01258 141 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 ZSCAN5DPP0CG00 497 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CDH6P55285 790 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 SESN2P58004 480 aaPredicted RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 TMA16Q96EY4 203 aaKnown RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 ZNF184Q99676 751 aaPredicted RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CCT7Q99832 543 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 MEI4A8MW99 385 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 PGM3O95394 542 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 RBP3P10745 1247 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 C11orf63Q6NUN7 778 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 INO80BQ9C086 356 aaPredicted RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 DTNAQ9Y4J8 743 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 AGLP35573 1532 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 RIPK1Q13546 671 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 WLSQ5T9L3 541 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 C1orf131Q8NDD1 294 aaKnown RBP13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CBWD6Q4V339 395 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CBWD3Q5JTY5 395 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 CBWD5Q5RIA9 395 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 FAM71DQ8N9W8 422 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 SLIT1O75093 1534 aa13.16□□□□□ -0.3
SSX2IP-201ENST00000342203 ESYT2A0FGR8 921 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PDE5AO76074 875 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CBWD2Q8IUF1 395 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 MAGEC3Q8TD91 643 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CLPTM1O96005 669 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 OCRLQ01968 901 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ALCAMQ13740 583 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 SPRED3Q2MJR0 410 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 NBPF20Q3BBV1 942 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PYDC1Q8WXC3 89 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 NMRK1Q9NWW6 199 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ZBTB39O15060 712 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PSEN1P49768 467 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 BCAR1P56945 870 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PPATQ06203 517 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 NOL4O94818 638 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PSMG1O95456 288 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 TFDP1Q14186 410 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ANKRD27Q96NW4 1050 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 FBXO6Q9NRD1 293 aaPredicted RBP13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 ARHGAP26Q9UNA1 814 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CCDC78A2IDD5 438 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 PYGBP11216 843 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 CYP11B1P15538 503 aa13.15□□□□□ -0.3
SSX2IP-201ENST00000342203 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms