RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 O00370 1275 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 DSG3P32926 999 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 OAZ1P54368 228 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 BACE1P56817 501 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 STRN3Q13033 797 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 XRCC4Q13426 336 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 MTERF2Q49AM1 385 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 PREPLQ4J6C6 727 aaPredicted RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 FUKQ8N0W3 1084 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 THAP12O43422 761 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ATP2C2O75185 946 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 TCEA3O75764 348 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 CFHP08603 1231 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ADCY8P40145 1251 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 CCNG2Q16589 344 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 MIS18BP1Q6P0N0 1132 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 CRELD2Q6UXH1 353 aaPredicted RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ABRAQ8N0Z2 381 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 HEMGNQ9BXL5 484 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 MRPL47Q9HD33 250 aaKnown RBP13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 NINJ2Q9NZG7 142 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
UBE2L3-201ENST00000342192 TMEM120BA0PK00 339 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 PIGRP01833 764 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 GNA15P30679 374 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 ACOT2P49753 483 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 TAS2R40P59535 323 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 MAMLD1Q13495 774 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 CRYMQ14894 314 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SUPT20HL1Q3ZLR7 823 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 PASD1Q8IV76 773 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SPDL1Q96EA4 605 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 DNAJC17Q9NVM6 304 aaKnown RBP13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 ZNF214Q9UL59 606 aaPredicted RBP13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SLC12A4Q9UP95 1085 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SCINQ9Y6U3 715 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 GSTA1P08263 222 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 KYNUQ16719 465 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 CCDC89Q8N998 374 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 BBOF1Q8ND07 529 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 OSBPL8Q9BZF1 889 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 PCDHB4Q9Y5E5 795 aa13.08□□□□□ -0.32
UBE2L3-201ENST00000342192 A0A1B0GUA9 196 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 STAM2O75886 525 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 OAS1P00973 400 aaKnown RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 CLTAP09496 248 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 CDC25CP30307 473 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 VPS41P49754 854 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 GNPTABQ3T906 1256 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 EXD1Q8NHP7 514 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 SH3GL3Q99963 347 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 PDGFDQ9GZP0 370 aaPredicted RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 A1CFQ9NQ94 594 aaKnown RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.07□□□□□ -0.324e-7■■□□□ 14.1
UBE2L3-201ENST00000342192 CNTN6Q9UQ52 1028 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 CREB1P16220 341 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 GBP2P32456 591 aaPredicted RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 NAMPTP43490 491 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 LRRC14Q15048 493 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 RELL1Q8IUW5 271 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 MGARPQ8TDB4 240 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 MICAL1Q8TDZ2 1067 aa13.07□□□□□ -0.32
UBE2L3-201ENST00000342192 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms