RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 H3BRB1 525 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 ADCY6O43306 1168 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 HLA-DRAP01903 254 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.15
TPM3-208ENST00000341485 LSP1P33241 339 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 PSMC4P43686 418 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 BIRC3Q13489 604 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 CYP1B1Q16678 543 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 EFCAB12Q6NXP0 572 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 C16orf70Q9BSU1 422 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 TUT1Q9H6E5 874 aaKnown RBP16.02■□□□□ 0.15
TPM3-208ENST00000341485 TMEM134Q9H6X4 195 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 KIAA1586Q9HCI6 787 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 PTPRJQ12913 1337 aa16.02■□□□□ 0.15
TPM3-208ENST00000341485 ADCY3O60266 1144 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 ZEB2O60315 1214 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 C4BPAP04003 597 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 SRGAP2CP0DJJ0 459 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 UNGP13051 313 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 CTGFP29279 349 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 HPDP32754 393 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 MDH1P40925 334 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 ZACNQ401N2 412 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 SPDYCQ5MJ68 293 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 AGBL2Q5U5Z8 902 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 CRELD2Q6UXH1 353 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 RUFY4Q6ZNE9 571 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 TLK2Q86UE8 772 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 RHPN2Q8IUC4 686 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 ZBTB45Q96K62 511 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 EPB41L4BQ9H329 900 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 FEZ2Q9UHY8 353 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 AGO2Q9UKV8 859 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 ANKRD65E5RJM6 399 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 VNN1O95497 513 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 RARAP10276 462 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 RPL21P46778 160 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 ACOT2P49753 483 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 PLTPP55058 493 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 RWDD2BP57060 319 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 TFDP1Q14186 410 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 CCDC137Q6PK04 289 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 RNF149Q8NC42 400 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 KCNN1Q92952 543 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
TPM3-208ENST00000341485 GNEQ9Y223 722 aaKnown RBP16.01■□□□□ 0.15
TPM3-208ENST00000341485 COL1A2P08123 1366 aa16■□□□□ 0.15
TPM3-208ENST00000341485 MAGEB2O15479 319 aa16■□□□□ 0.15
TPM3-208ENST00000341485 C22orf31O95567 290 aa16■□□□□ 0.15
TPM3-208ENST00000341485 PIGRP01833 764 aa16■□□□□ 0.15
TPM3-208ENST00000341485 TNNI1P19237 187 aa16■□□□□ 0.15
TPM3-208ENST00000341485 COILP38432 576 aaPredicted RBP16■□□□□ 0.15
TPM3-208ENST00000341485 PIK3CAP42336 1068 aa16■□□□□ 0.15
TPM3-208ENST00000341485 CLCN3P51790 818 aa16■□□□□ 0.15
TPM3-208ENST00000341485 EFNA5P52803 228 aa16■□□□□ 0.15
TPM3-208ENST00000341485 LACTBP83111 547 aaPredicted RBP16■□□□□ 0.15
TPM3-208ENST00000341485 PTGISQ16647 500 aa16■□□□□ 0.15
TPM3-208ENST00000341485 WDR44Q5JSH3 913 aa16■□□□□ 0.15
TPM3-208ENST00000341485 SPOPLQ6IQ16 392 aa16■□□□□ 0.15
TPM3-208ENST00000341485 C10orf67Q8IYJ2 551 aa16■□□□□ 0.15
TPM3-208ENST00000341485 FAM81BQ96LP2 452 aa16■□□□□ 0.15
TPM3-208ENST00000341485 TRIM7Q9C029 511 aa16■□□□□ 0.15
TPM3-208ENST00000341485 ARHGAP39Q9C0H5 1083 aa16■□□□□ 0.15
TPM3-208ENST00000341485 C2orf40Q9H1Z8 148 aa16■□□□□ 0.15
TPM3-208ENST00000341485 CREBZFQ9NS37 354 aa16■□□□□ 0.15
TPM3-208ENST00000341485 BCCIPQ9P287 314 aaKnown RBP eCLIP16■□□□□ 0.15
TPM3-208ENST00000341485 ANAPC7Q9UJX3 599 aa16■□□□□ 0.15
TPM3-208ENST00000341485 ERLIN2O94905 339 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 EDN1P05305 212 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 HOXD8P13378 290 aaPredicted RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 CORO7P57737 925 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 ZBTB41Q5SVQ8 909 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 CPA5Q8WXQ8 436 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 ZBTB10Q96DT7 871 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 AP5M1Q9H0R1 490 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 EPN3Q9H201 632 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 AVENQ9NQS1 362 aaPredicted RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 MTUS1Q9ULD2 1270 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 MROH7Q68CQ1 1323 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 EBAG9O00559 213 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 PODXLO00592 558 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 ASAP2O43150 1006 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 ACO1P21399 889 aaKnown RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 PMS2P54278 862 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 KRT71Q3SY84 523 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 SLFN12LQ6IEE8 588 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 PHLDB2Q86SQ0 1253 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 ZNF677Q86XU0 584 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 ARFGAP2Q8N6H7 521 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms