RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MFSD6LQ8IWD5 586 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 GPR65Q8IYL9 337 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 SAMD3Q8N6K7 520 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 CLEC18CQ8NCF0 446 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 FAM200AQ8TCP9 573 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 RSPRY1Q96DX4 576 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 TPSD1Q9BZJ3 242 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 VAT1LQ9HCJ6 419 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 AVENQ9NQS1 362 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-201ENST00000340660 CENPEQ02224 2701 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 E9PAM4 449 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 TNFRSF10BO14763 440 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 POMCP01189 267 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 STAT5BP51692 787 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 DGKEP52429 567 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 SEMG2Q02383 582 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 PEAR1Q5VY43 1037 aaPredicted RBP12.63□□□□□ -0.39
ATXN3-201ENST00000340660 COLGALT2Q8IYK4 626 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 GALNT15Q8N3T1 639 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 APPBP2Q92624 585 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 POM121Q96HA1 1249 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
ATXN3-201ENST00000340660 KIF2CQ99661 725 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 CLSTN3Q9BQT9 956 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 PI4K2AQ9BTU6 479 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 NAPBQ9H115 298 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 ZNF768Q9H5H4 540 aaKnown RBP12.63□□□□□ -0.39
ATXN3-201ENST00000340660 CAPN10Q9HC96 672 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 SLC6A14Q9UN76 642 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
ATXN3-201ENST00000340660 GON4LQ3T8J9 2241 aa12.63□□□□□ -0.39
ATXN3-201ENST00000340660 MYH6P13533 1939 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
ATXN3-201ENST00000340660 NID2Q14112 1375 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 HEPACAM2A8MVW5 462 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 ADAM12O43184 909 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 CSDE1O75534 798 aaKnown RBP12.62□□□□□ -0.39
ATXN3-201ENST00000340660 ATP5JP18859 108 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 OR1G1P47890 313 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 GFPT1Q06210 699 aaPredicted RBP12.62□□□□□ -0.39
ATXN3-201ENST00000340660 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 USP39Q53GS9 565 aaKnown RBP12.62□□□□□ -0.39
ATXN3-201ENST00000340660 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
ATXN3-201ENST00000340660 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 SPACA3Q8IXA5 215 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 PILRBQ9UKJ0 227 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
ATXN3-201ENST00000340660 TMEM229AB2RXF0 380 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 CHADO15335 359 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 ORC4O43929 436 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 ELAVL4P26378 380 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 CCR2P41597 374 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 CLCN3P51790 818 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 CREMQ03060 361 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 RTP2Q5QGT7 225 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 PCNX4Q63HM2 1172 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 NLRX1Q86UT6 975 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 ERC1Q8IUD2 1116 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
ATXN3-201ENST00000340660 PGBD3Q8N328 593 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 METTL13Q8N6R0 699 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 NXPE2Q96DL1 559 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 ALG2Q9H553 416 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 SNTG2Q9NY99 539 aa12.61□□□□□ -0.39
ATXN3-201ENST00000340660 PCNX1Q96RV3 2341 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 COL1A2P08123 1366 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 HBP1O60381 514 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 ZNF623O75123 536 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 ITPKAP23677 461 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 MAP2K3P46734 347 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 SMTNP53814 917 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 NFKB2Q00653 900 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 UVSSAQ2YD98 709 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 ARHGAP40Q5TG30 622 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 TWF2Q6IBS0 349 aaKnown RBP12.6□□□□□ -0.39
ATXN3-201ENST00000340660 FUT10Q6P4F1 479 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 ZNF295-AS1Q8N0V1 137 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 GPRASP2Q96D09 838 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms