RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ARMCX6Q7L4S7 300 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 FAM81AQ8TBF8 368 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 SPIRE2Q8WWL2 714 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 LSM14BQ9BX40 385 aaKnown RBP16.1■□□□□ 0.17
BRAT1-201ENST00000340611 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 PALMO75781 387 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 FGFR4P22455 802 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 HNRNPH3P31942 346 aaKnown RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 POLE2P56282 527 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 CCDC63Q8NA47 563 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 PSPC1Q8WXF1 523 aaKnown RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 ATP6V1G3Q96LB4 118 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 FAM213AQ9BRX8 229 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 ZFATQ9P243 1243 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 GMNCA6NCL1 334 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 EVI5O60447 810 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 ALDH1A1P00352 501 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 TNFRSF8P28908 595 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 LIG4P49917 911 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 HLTFQ14527 1009 aaKnown RBP eCLIP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 GRIK4Q16099 956 aa16.09■□□□□ 0.17
BRAT1-201ENST00000340611 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 NOP53Q9NZM5 478 aaKnown RBP16.09■□□□□ 0.17
BRAT1-201ENST00000340611 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 PDHA1P08559 390 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.17
BRAT1-201ENST00000340611 NAMPTP43490 491 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 ARID5AQ03989 594 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 ODF2Q5BJF6 829 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.17
BRAT1-201ENST00000340611 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 RMI1Q9H9A7 625 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.17
BRAT1-201ENST00000340611 AJAP1Q9UKB5 411 aaPredicted RBP16.08■□□□□ 0.17
BRAT1-201ENST00000340611 UBE4BO95155 1302 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 A0A087WZ62 844 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 IGKV6-21A0A0C4DH24 114 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 A6NJR5 290 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 FERP16591 822 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 GCLMP48507 274 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
BRAT1-201ENST00000340611 SCARA3Q6AZY7 606 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 CPLX4Q7Z7G2 160 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 XXYLT1Q8NBI6 393 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 BAP1Q92560 729 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 CCDC97Q96F63 343 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-201ENST00000340611 FDXACB1Q9BRP7 624 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-201ENST00000340611 BLOC1S6Q9UL45 172 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 NOL4O94818 638 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 GNA14O95837 355 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
BRAT1-201ENST00000340611 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 OSTNP61366 133 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 STRN3Q13033 797 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
BRAT1-201ENST00000340611 RAD51CO43502 376 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 ADCY3O60266 1144 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 LCA5LO95447 670 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 DLATP10515 647 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 TUBP50607 506 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 PPP3CAQ08209 521 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 BLMHQ13867 455 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 SNRNP35Q16560 246 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 GLE1Q53GS7 698 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 IER5Q5VY09 327 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 GORASP1Q9BQQ3 440 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 C17orf75Q9HAS0 396 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 GGT7Q9UJ14 662 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 IGHA2P01877 340 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 CYBAP13498 195 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 SLC26A2P50443 739 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 RTP1P59025 263 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 BFSP1Q12934 665 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 FSCN1Q16658 493 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 DDX42Q86XP3 938 aaKnown RBP eCLIP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 RBM41Q96IZ5 413 aaKnown RBP16.07■□□□□ 0.16
BRAT1-201ENST00000340611 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 C2CD2Q9Y426 696 aa16.07■□□□□ 0.16
BRAT1-201ENST00000340611 A8MUI8 341 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms