RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RSPO2Q6UXX9 243 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-201ENST00000340074 ANKS3Q6ZW76 656 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 CXorf38Q8TB03 319 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 PLEKHO2Q8TD55 490 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 MTRRQ9UBK8 725 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 SIX4Q9UIU6 781 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 CD207Q9UJ71 328 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 ITGA11Q9UKX5 1188 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 AGAP1Q9UPQ3 857 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
UBE3B-201ENST00000340074 TIMM13Q9Y5L4 95 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-201ENST00000340074 DOCK6Q96HP0 2047 aa16.46■□□□□ 0.22
UBE3B-201ENST00000340074 GLUD1P00367 558 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TNNC2P02585 160 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 KRT19P08727 400 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 RPL13P26373 211 aaKnown RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TAF6P49848 677 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 ADAM9Q13443 819 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 MRPL58Q14197 206 aaKnown RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 EDRF1Q3B7T1 1238 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SYCE2Q6PIF2 218 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 APPL2Q8NEU8 664 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 GPT2Q8TD30 523 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SENP8Q96LD8 212 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 ZNF560Q96MR9 790 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 APOL5Q9BWW9 433 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 BACE2Q9Y5Z0 518 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 CDY1Q9Y6F8 540 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TRIM49BA6NDI0 452 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TGM5O43548 720 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 AKAP3O75969 853 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SPATA31D3P0C874 917 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 BMP1P13497 986 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 HOXB8P17481 243 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 PAX3P23760 479 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 OR1D2P34982 312 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 PNPLA4P41247 253 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 RBP5P82980 135 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 STIM1Q13586 685 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SV2CQ496J9 727 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 PTCRAQ6ISU1 281 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SPATA31D4Q6ZUB0 917 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TRAPPC11Q7Z392 1133 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 SMRP1Q8NCR6 262 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 BORCS6Q96GS4 357 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 TSG101Q99816 390 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 MAN1C1Q9NR34 630 aa16.45■□□□□ 0.22
UBE3B-201ENST00000340074 GRXCR2A6NFK2 248 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 LRRIQ3A6PVS8 624 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-201ENST00000340074 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 H7C4K7 107 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 PSMA7O14818 248 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 MAPK13O15264 365 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 MBTPS2O43462 519 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 TBC1D4O60343 1298 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 ODC1P11926 461 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 IL9P15248 144 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 PSMC2P35998 433 aaKnown RBP16.44■□□□□ 0.22
UBE3B-201ENST00000340074 DLG4P78352 724 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 CLDN10P78369 228 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-201ENST00000340074 CTXN3Q4LDR2 81 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 KLHL10Q6JEL2 608 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 ZNF280DQ6N043 979 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 USP37Q86T82 979 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 LRRC52Q8N7C0 313 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-201ENST00000340074 TRIML1Q8N9V2 468 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-201ENST00000340074 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 S1PR5Q9H228 398 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 DZANK1Q9NVP4 752 aa16.44■□□□□ 0.22
UBE3B-201ENST00000340074 CYB561D2O14569 222 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 CETN3O15182 167 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-201ENST00000340074 CCNE1P24864 410 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 PPP1R2P41236 205 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 MUC3AQ02505 3323 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 LRRC63Q05C16 580 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 BFSP1Q12934 665 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 SMAD4Q13485 552 aaKnown RBP16.43■□□□□ 0.22
UBE3B-201ENST00000340074 RAB33AQ14088 237 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
UBE3B-201ENST00000340074 DENND4AQ7Z401 1863 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 FAM186BQ8IYM0 893 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 TMC2Q8TDI7 906 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
UBE3B-201ENST00000340074 R3HCC1Q9Y3T6 440 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms