RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PHKA2P46019 1235 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 TAF1CQ15572 869 aaPredicted RBP16.48■□□□□ 0.23
MBD1-203ENST00000339998 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 CYP4A22Q5TCH4 519 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 JPH2Q9BR39 696 aaPredicted RBP16.48■□□□□ 0.23
MBD1-203ENST00000339998 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 EPHB4P54760 987 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
MBD1-203ENST00000339998 ATP13A4Q4VNC1 1196 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 GLE1Q53GS7 698 aaKnown RBP16.48■□□□□ 0.23
MBD1-203ENST00000339998 SMYD3Q9H7B4 428 aa16.48■□□□□ 0.23
MBD1-203ENST00000339998 CD19P15391 556 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 TMOD1P28289 359 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
MBD1-203ENST00000339998 CENPCQ03188 943 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 PRELID2Q8N945 189 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
MBD1-203ENST00000339998 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
MBD1-203ENST00000339998 OSMRQ99650 979 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 NIF3L1Q9GZT8 377 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 ADAM21Q9UKJ8 722 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 SLC45A1Q9Y2W3 748 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 RNF40O75150 1001 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 POU5F1Q01860 360 aaKnown RBP16.47■□□□□ 0.23
MBD1-203ENST00000339998 GLRA4Q5JXX5 417 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 UBL4BQ8N7F7 174 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 HEMGNQ9BXL5 484 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
MBD1-203ENST00000339998 PIK3R2O00459 728 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 TSPAN1O60635 241 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 KRT14P02533 472 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 TNNC2P02585 160 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 TAS2R40P59535 323 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 DGKDQ16760 1214 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 ANKS1BQ7Z6G8 1248 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 UBR7Q8N806 425 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 ANKRD36BP1Q96IX9 119 aa16.47■□□□□ 0.23
MBD1-203ENST00000339998 MKI67P46013 3256 aaKnown RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 GOLGA6BA6NDN3 693 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 MTA2O94776 668 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 TBXAS1P24557 533 aaPredicted RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 PTP4A2Q12974 167 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 MAMLD1Q13495 774 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 SNX1Q13596 522 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 ZNF771Q7L3S4 317 aaPredicted RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 OR2W6PQ8NHA6 318 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 ATG4AQ8WYN0 398 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 KAT2BQ92831 832 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 APOL6Q9BWW8 343 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 UVRAGQ9P2Y5 699 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 MYO1FO00160 1098 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 POLR2BP30876 1174 aaKnown RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 ZNF132P52740 706 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 ENPEPQ07075 957 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 HSP90B2PQ58FF3 399 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 CALR3Q96L12 384 aaKnown RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
MBD1-203ENST00000339998 PPME1Q9Y570 386 aa16.46■□□□□ 0.23
MBD1-203ENST00000339998 PPEF2O14830 753 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 ASAP2O43150 1006 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 B4GALT4O60513 344 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 ERLIN2O94905 339 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 RARAP10276 462 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 CTGFP29279 349 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 BPIFB4P59827 614 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 FKBP1BP68106 108 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 GABPB1Q06547 395 aaPredicted RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 RASAL3Q86YV0 1011 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 EXOC8Q8IYI6 725 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 ARL8AQ96BM9 186 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 ZIM3Q96PE6 472 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 RPS6KC1Q96S38 1066 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 LRRC4CQ9HCJ2 640 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 CYTH4Q9UIA0 394 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 SNX24Q9Y343 169 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 MAGEB2O15479 319 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 CTNNA1P35221 906 aaKnown RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 PAK2Q13177 524 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 DENND1BQ6P3S1 775 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 TMEM40Q8WWA1 233 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 MAGOHBQ96A72 148 aaKnown RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 EMID1Q96A84 441 aaPredicted RBP16.45■□□□□ 0.22
MBD1-203ENST00000339998 CNTN6Q9UQ52 1028 aa16.45■□□□□ 0.22
MBD1-203ENST00000339998 TLR3O15455 904 aaKnown RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 SMIM10L2AP0DMW4 78 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 SMIM10L2BP0DMW5 78 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 UBAP2Q5T6F2 1119 aaKnown RBP16.44■□□□□ 0.22
MBD1-203ENST00000339998 TLK2Q86UE8 772 aa16.44■□□□□ 0.22
MBD1-203ENST00000339998 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms