RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 EMC2Q15006 297 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 C11orf63Q6NUN7 778 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 NME8Q8N427 588 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 TRIM6Q9C030 488 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 AS3MTQ9HBK9 375 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 PCDHA3Q9Y5H8 950 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 GYG2O15488 501 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 COPS2P61201 443 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 KIF22Q14807 665 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 MCOLN2Q8IZK6 566 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 MIS12Q9H081 205 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 NINJ2Q9NZG7 142 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 KRT3P12035 628 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 CDH6P55285 790 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM102AQ5T9C2 384 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 FAM71DQ8N9W8 422 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 ADPGKQ9BRR6 497 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 MTMR12Q9C0I1 747 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 SLCO1B3Q9NPD5 702 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 DNPEPQ9ULA0 475 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 M0QYV0 167 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 CNGA2Q16280 664 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 LONP2Q86WA8 852 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 CCNYQ8ND76 341 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 LRRN4Q8WUT4 740 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 PDCD2LQ9BRP1 358 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
SEMA4D-201ENST00000339861 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CPP00450 1065 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CYP3A4P08684 503 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SSTR1P30872 391 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ACTR2P61160 394 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 PDE1BQ01064 536 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CAV1Q03135 178 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 MAPK6Q16659 721 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CLEC16AQ2KHT3 1053 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 LGSNQ5TDP6 509 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SLFN12LQ6IEE8 588 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 RASGEF1CQ8N431 466 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 AGR3Q8TD06 166 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SERPINB12Q96P63 405 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 TRIM55Q9BYV6 548 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 PHTF1Q9UMS5 762 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CFAP73A6NFT4 308 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 P4HA2O15460 535 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 LPXNO60711 386 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ZBED1O96006 694 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SLC1A1P43005 524 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CUL2Q13617 745 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 STXBP2Q15833 593 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 MFSD7Q6UXD7 560 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ZNF572Q7Z3I7 529 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 UBA3Q8TBC4 463 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ATXN7L3BQ96GX2 97 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ROPN1BQ9BZX4 212 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 DCLK3Q9C098 648 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ROPN1Q9HAT0 212 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 A8MUI8 341 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 BTNL10A8MVZ5 291 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 F8VP50 259 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SLC26A4O43511 780 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 PKN2Q16513 984 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 BMT2Q1RMZ1 405 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SUGP1Q8IWZ8 645 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 PGM2Q96G03 612 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 COL20A1Q9P218 1284 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 COPEO14579 308 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 ZBTB7AO95365 584 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 RAP1GAPP47736 663 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 RPL7AP62424 266 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 KDSRQ06136 332 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SDCCAG8Q86SQ7 713 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SMYD2Q9NRG4 433 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SLC12A6Q9UHW9 1150 aa11.69□□□□□ -0.54
SEMA4D-201ENST00000339861 SUFUQ9UMX1 484 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms