RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ZCCHC9Q8N567 271 aaKnown RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 FBXO27Q8NI29 283 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 NMD3Q96D46 503 aaKnown RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 PANX3Q96QZ0 392 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 EYA3Q99504 573 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 MKNK1Q9BUB5 465 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 POLR3CQ9BUI4 534 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 OSBPL8Q9BZF1 889 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 EPB41L1Q9H4G0 881 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 SUDS3Q9H7L9 328 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 PICK1Q9NRD5 415 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 CHMP2BQ9UQN3 213 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-201ENST00000339754 TAF1P21675 1872 aa9.94□□□□□ -0.82
NECAP1-201ENST00000339754 A0A0J9YVX5 310 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SMIM31A0A1B0GVY4 71 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ZNF862O60290 1169 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ZBED4O75132 1171 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 GZMAP12544 262 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 NOVP48745 357 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 HPCAP84074 193 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SPIRE1Q08AE8 756 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 COG2Q14746 738 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 R3HDM1Q15032 1099 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 CFAP157Q5JU67 520 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 PCNX4Q63HM2 1172 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 RIPOR1Q6ZS17 1223 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 NET1Q7Z628 596 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TTC7BQ86TV6 843 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 LRRC6Q86X45 466 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 BBOF1Q8ND07 529 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SNED1Q8TER0 1413 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 CEP95Q96GE4 821 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 FAM161BQ96MY7 647 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TRIM55Q9BYV6 548 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ADAM33Q9BZ11 813 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SSU72Q9NP77 194 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 UBE2TQ9NPD8 197 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 PPM1HQ9ULR3 514 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 DNM3Q9UQ16 869 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 MTO1Q9Y2Z2 717 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 hCG_2014768A0A024R1R8 64 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SFI1A8K8P3 1242 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 RAD21O60216 631 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 USP1O94782 785 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SGPL1O95470 568 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 DLDP09622 509 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 KRT4P19013 534 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ABCD1P33897 745 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 CDK8P49336 464 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ACTR3P61158 418 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 DLGAP5Q15398 846 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 FAM91A1Q658Y4 838 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 PDSS2Q86YH6 399 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ARHGEF19Q8IW93 802 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 ARHGAP24Q8N264 748 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TGFBRAP1Q8WUH2 860 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 IRGQQ8WZA9 623 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 DGCR14Q96DF8 476 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TTC1Q99614 292 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TMEM120AQ9BXJ8 343 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SAYSD1Q9NPB0 183 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 DMAC2Q9NW81 257 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 NDE1Q9NXR1 346 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 TFCP2L1Q9NZI6 479 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SAP30BPQ9UHR5 308 aaKnown RBP9.93□□□□□ -0.82
NECAP1-201ENST00000339754 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 JAG2Q9Y219 1238 aa9.93□□□□□ -0.82
NECAP1-201ENST00000339754 SPATA31A6Q5VVP1 1343 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 B2RBV5 119 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 F5H6K3 240 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 EML1O00423 815 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 VILLO15195 856 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 OPHN1O60890 802 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 BCRP11274 1271 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 PLS3P13797 630 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 KLRC2P26717 231 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 ALDH1B1P30837 517 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 ERFP50548 548 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 AP2B1P63010 937 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 MYL7Q01449 175 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 ITGA9Q13797 1035 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 RASA2Q15283 850 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
NECAP1-201ENST00000339754 Q4G0T1 1027 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 TMCO4Q5TGY1 634 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 NSMFQ6X4W1 530 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 RAPH1Q70E73 1250 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 TMPRSS6Q8IU80 811 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 SCUBE1Q8IWY4 988 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 DNAJC1Q96KC8 554 aaKnown RBP9.92□□□□□ -0.82
NECAP1-201ENST00000339754 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
NECAP1-201ENST00000339754 FOXP3Q9BZS1 431 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms