RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RHOT2Q8IXI1 618 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 EXOC8Q8IYI6 725 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 SYCE1Q8N0S2 351 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 KRT222Q8N1A0 295 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 WDTC1Q8N5D0 677 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 UBR7Q8N806 425 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 NFKBIZQ9BYH8 718 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 SMYD3Q9H7B4 428 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 STIM2Q9P246 746 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 ANAPC7Q9UJX3 599 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 NFU1Q9UMS0 254 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 DAAM1Q9Y4D1 1078 aa7.9□□□□□ -1.14
SRFBP1-201ENST00000339397 A0A1B0GUA9 196 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 MANSC4A6NHS7 340 aaPredicted RBP7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 PGK1P00558 417 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 F2P00734 622 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 TCF4P15884 667 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 AKAP5P24588 427 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 IGFBP6P24592 240 aaPredicted RBP7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 TNNT3P45378 269 aaPredicted RBP7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 NOMO3P69849 1222 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 ITIH3Q06033 890 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 ENPEPQ07075 957 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 SGSM1Q2NKQ1 1148 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 CYP4F22Q6NT55 531 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 FMNL3Q8IVF7 1028 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 ACTRT1Q8TDG2 376 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 CD101Q93033 1021 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 HERPUD2Q9BSE4 406 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 OSBPL7Q9BZF2 842 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 IMPG2Q9BZV3 1241 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 RNF39Q9H2S5 420 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 SLC5A4Q9NY91 659 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 SNTG2Q9NY99 539 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 GTF3C4Q9UKN8 822 aa7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.15
SRFBP1-201ENST00000339397 TARSL2A2RTX5 802 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ERLIN2O94905 339 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 NPTXRO95502 500 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SLC10A3P09131 477 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CYP2C9P11712 490 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF132P52740 706 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SMC1AQ14683 1233 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 MFSD10Q14728 455 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM187BQ17R55 369 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 MON1BQ7L1V2 547 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 RASGEF1CQ8N431 466 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 C1orf131Q8NDD1 294 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CASKIN2Q8WXE0 1202 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 PBKQ96KB5 322 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SELENOOQ9BVL4 669 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 APOL6Q9BWW8 343 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 NIF3L1Q9GZT8 377 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CYTH4Q9UIA0 394 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CNTN6Q9UQ52 1028 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ANK1P16157 1881 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ZSWIM8A7E2V4 1837 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TTI1O43156 1089 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 HCRTO43612 131 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SPOPO43791 374 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ZEB2O60315 1214 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 POLR2BP30876 1174 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 NSFP46459 744 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ADAM17P78536 824 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CENPCQ03188 943 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 PTP4A2Q12974 167 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ATP13A4Q4VNC1 1196 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CYP4A22Q5TCH4 519 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ANKS1BQ7Z6G8 1248 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 WHAMMQ8TF30 809 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ANKRD36BP1Q96IX9 119 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 LPIN3Q9BQK8 851 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 NXF3Q9H4D5 531 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 KLK14Q9P0G3 267 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ADAM22Q9P0K1 906 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CACNG4Q9UBN1 327 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 RNF14Q9UBS8 474 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 ATP8B3O60423 1300 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 PASKQ96RG2 1323 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 PIK3R2O00459 728 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TNNC2P02585 160 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 C6orf222P0C671 652 aaPredicted RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TBXAS1P24557 533 aaPredicted RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 HADHBP55084 474 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TUBB4BP68371 445 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 POU5F1BQ06416 359 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 MAMLD1Q13495 774 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CXCL17Q6UXB2 119 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 SND1Q7KZF4 910 aaKnown RBP eCLIP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 CATSPER4Q7RTX7 472 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 HDXQ7Z353 690 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 C12orf29Q8N999 325 aa7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 TSEN2Q8NCE0 465 aaKnown RBP7.89□□□□□ -1.15
SRFBP1-201ENST00000339397 WNT8BQ93098 351 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms