RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 CLTAP09496 248 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 INSRRP14616 1297 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 EPHB4P54760 987 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 GUCY2DQ02846 1103 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 SURF1Q15526 300 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 CLEC16AQ2KHT3 1053 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ZNF484Q5JVG2 852 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ATF7IP2Q5U623 682 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 MPZL3Q6UWV2 235 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 TSHZ1Q6ZSZ6 1077 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ZNF564Q8TBZ8 553 aaPredicted RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 KAT2BQ92831 832 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 NAP1L3Q99457 506 aaPredicted RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 NUP85Q9BW27 656 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 PHF24Q9UPV7 400 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 H3BRB1 525 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 FGGP02679 453 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 CYP1A2P05177 515 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ACLYP53396 1101 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 PTENP60484 403 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 MESDQ14696 234 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 EMBQ6PCB8 327 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 TMEM270Q6UE05 265 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ABHD8Q96I13 439 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 RNPC3Q96LT9 517 aaKnown RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 MTMR12Q9C0I1 747 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 FZD8Q9H461 694 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 EPB41L5Q9HCM4 733 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 TTC7AQ9ULT0 858 aaPredicted RBP11.84□□□□□ -0.51
LRP1-202ENST00000338962 PCDHB4Q9Y5E5 795 aa11.84□□□□□ -0.51
LRP1-202ENST00000338962 ABLIM1O14639 778 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 MAGEB2O15479 319 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 RAD51CO43502 376 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 ZNF286BP0CG31 522 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
LRP1-202ENST00000338962 PROZP22891 400 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 PHKA2P46019 1235 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 CLUL1Q15846 466 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
LRP1-202ENST00000338962 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 RPS6KC1Q96S38 1066 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 NFKBIZQ9BYH8 718 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 GDF3Q9NR23 364 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
LRP1-202ENST00000338962 NUB1Q9Y5A7 615 aa11.83□□□□□ -0.52
LRP1-202ENST00000338962 ESYT3A0FGR9 886 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 ZSCAN5CA6NGD5 496 aaPredicted RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 H3BQF6 201 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 B4GALT5O43286 388 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 SART1O43290 800 aaKnown RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 SPOPO43791 374 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 CALCAP01258 141 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 MYL3P08590 195 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 COL6A1P12109 1028 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 UNGP13051 313 aaPredicted RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 TMOD1P28289 359 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 GNA15P30679 374 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 NSFP46459 744 aaKnown RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 PAK2Q13177 524 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 IFT81Q8WYA0 676 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 DDX47Q9H0S4 455 aaKnown RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 YY1AP1Q9H869 796 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 PTPRHQ9HD43 1115 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 MED4Q9NPJ6 270 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 PRMT7Q9NVM4 692 aaPredicted RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 HPCAL4Q9UM19 191 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 AKT3Q9Y243 479 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 TULP2O00295 520 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 TMEM191BP0C7N4 346 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 MYBL1P10243 752 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 COMTP21964 271 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 OSTNP61366 133 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 TFAMQ00059 246 aaKnown RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 TRPC3Q13507 836 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 TRIM72Q6ZMU5 477 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 ALG3Q92685 438 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 ZBTB9Q96C00 473 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 GLT1D1Q96MS3 346 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms