RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 ODC1P11926 461 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 EEF1B2P24534 225 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 TYK2P29597 1187 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 ACTR2P61160 394 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 P3H1Q32P28 736 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 TRMT10CQ7L0Y3 403 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 PGBD3Q8N328 593 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 KRT35Q92764 455 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 NRBF2Q96F24 287 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 CFAP69A5D8W1 941 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 H7C4K7 107 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 LMNAP02545 664 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 KCNA4P22459 653 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 ATN1P54259 1190 aaPredicted RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 RPS6P62753 249 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 HIF1AQ16665 826 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 DAGLBQ8NCG7 672 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 RNPC3Q96LT9 517 aaKnown RBP8.12□□□□□ -1.11
TRIM2-201ENST00000338700 FOPNLQ96NB1 174 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 LRRC37BQ96QE4 947 aa8.12□□□□□ -1.11
TRIM2-201ENST00000338700 TOMM70O94826 608 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 RPLP2P05387 115 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 KITP10721 976 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 RAG1P15918 1043 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TAF6P49848 677 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MAPRE1Q15691 268 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 EFHC1Q5JVL4 640 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TEDDM1Q5T9Z0 273 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ZNF677Q86XU0 584 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MTBPQ96DY7 904 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MCEEQ96PE7 176 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 UNC45AQ9H3U1 944 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 CASS4Q9NQ75 786 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ITIH6Q6UXX5 1313 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 LRG1P02750 347 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HARS2P49590 506 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 BACE1P56817 501 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 FKBP1AP62942 108 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ARHGEF7Q14155 803 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 PDIA6Q15084 440 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLC18A3Q16572 532 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLC30A5Q8TAD4 765 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLC35G2Q8TBE7 412 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLC26A7Q8TE54 656 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SCFD1Q8WVM8 642 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 RUBCNQ92622 972 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ZFP69BQ9UJL9 534 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 FAF1Q9UNN5 650 aaPredicted RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HNRNPCL2B2RXH8 293 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 CA12O43570 354 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 KPNA6O60684 536 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HNRNPCL1O60812 293 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 E2F6O75461 281 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ANTXR2P58335 489 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TSPAN17Q96FV3 270 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 CAPNS2Q96L46 248 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 THPOP40225 353 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 PPATQ06203 517 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TMED1Q13445 227 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MMS22LQ6ZRQ5 1243 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 MFN1Q8IWA4 741 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SPATA17Q96L03 361 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ASPSCR1Q9BZE9 553 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SATB2Q9UPW6 733 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SPAG7O75391 227 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HIST1H2AGP0C0S8 130 aaPredicted RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 UCHL3P15374 230 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HIST1H2ADP20671 130 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ALDH7A1P49419 539 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 NLRP11P59045 1033 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 NCAPHQ15003 741 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ZC2HC1CQ53FD0 456 aaPredicted RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ARHGEF26Q96DR7 871 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HPDLQ96IR7 371 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HIST1H2AHQ96KK5 128 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLITRK1Q96PX8 696 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 HIST1H2AJQ99878 128 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 H2AFJQ9BTM1 129 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 KIFC3Q9BVG8 833 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 SLC13A1Q9BZW2 595 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 AIPL1Q9NZN9 384 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ZFATQ9P243 1243 aa8.11□□□□□ -1.11
TRIM2-201ENST00000338700 UBQLN1Q9UMX0 589 aaKnown RBP8.11□□□□□ -1.11
TRIM2-201ENST00000338700 ATRNO75882 1429 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms