RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 MCM4P33991 863 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 ATAT1Q5SQI0 421 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 SCARA3Q6AZY7 606 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 SLC8B1Q6J4K2 584 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 ARMCX5Q6P1M9 558 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 C15orf39Q6ZRI6 1047 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 STXBP4Q6ZWJ1 553 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 KIAA0895Q8NCT3 520 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 BEST2Q8NFU1 509 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 FAM84AQ96KN4 292 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 RHOBTB2Q9BYZ6 727 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 FAM86C1Q9NVL1 165 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 PCDHB8Q9UN66 801 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 ZFHX2Q9C0A1 2572 aaPredicted RBP16.54■□□□□ 0.24
PRKN-201ENST00000338468 UBE4BO95155 1302 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 ZMYND10O75800 440 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 IL18RAPO95256 599 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
PRKN-201ENST00000338468 SP100P23497 879 aaPredicted RBP16.53■□□□□ 0.24
PRKN-201ENST00000338468 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
PRKN-201ENST00000338468 LILRA4P59901 499 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 STK4Q13043 487 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 KMT5BQ4FZB7 885 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 ATOH1Q92858 354 aaPredicted RBP16.53■□□□□ 0.24
PRKN-201ENST00000338468 ASIC4Q96FT7 647 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 RBAKQ9NYW8 714 aaPredicted RBP16.53■□□□□ 0.24
PRKN-201ENST00000338468 HSPBP1Q9NZL4 362 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 DPP7Q9UHL4 492 aa16.53■□□□□ 0.24
PRKN-201ENST00000338468 SCN1AP35498 2009 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 C2CD4DB7Z1M9 353 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 ROR1Q01973 937 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 PTPN21Q16825 1174 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 CBWD2Q8IUF1 395 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 CXorf38Q8TB03 319 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 BORCS6Q96GS4 357 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 PDE11AQ9HCR9 933 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 DPP3Q9NY33 737 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 FBXL5Q9UKA1 691 aa16.52■□□□□ 0.24
PRKN-201ENST00000338468 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
PRKN-201ENST00000338468 PTPRJQ12913 1337 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 WDR27A2RRH5 827 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 KIAA0391O15091 583 aaKnown RBP16.51■□□□□ 0.23
PRKN-201ENST00000338468 CLIC2O15247 247 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 ABLIM3O94929 683 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 ZNF202O95125 648 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 OAZ2O95190 189 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 MYL1P05976 194 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 C8AP07357 584 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 AVPR2P30518 371 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 DPYDQ12882 1025 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 CTXN3Q4LDR2 81 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
PRKN-201ENST00000338468 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 SMG7Q92540 1137 aaKnown RBP16.51■□□□□ 0.23
PRKN-201ENST00000338468 PRKD2Q9BZL6 878 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 WDR6Q9NNW5 1121 aaKnown RBP16.51■□□□□ 0.23
PRKN-201ENST00000338468 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 EXOC1Q9NV70 894 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 TSC2P49815 1807 aa16.51■□□□□ 0.23
PRKN-201ENST00000338468 H7C4K7 107 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 N4BP1O75113 896 aaKnown RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 SNW1Q13573 536 aaKnown RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 KNOP1Q1ED39 458 aaKnown RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 ELMSAN1Q6PJG2 1045 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 C12orf56Q8IXR9 622 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 C1orf127Q8N9H9 656 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 ZNF461Q8TAF7 563 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 SLC7A14Q8TBB6 771 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 SENP8Q96LD8 212 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 GZF1Q9H116 711 aaPredicted RBP16.5■□□□□ 0.23
PRKN-201ENST00000338468 USTQ9Y2C2 406 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
PRKN-201ENST00000338468 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 SEC24AO95486 1093 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 VNN2O95498 520 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 HNRNPA1P09651 372 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRKN-201ENST00000338468 TYMPP19971 482 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 HOXA9P31269 272 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 NUBP1P53384 320 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 ARPP19P56211 112 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
PRKN-201ENST00000338468 TFAMQ00059 246 aaKnown RBP16.49■□□□□ 0.23
PRKN-201ENST00000338468 FOXK2Q01167 660 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 YWHAHQ04917 246 aaPredicted RBP16.49■□□□□ 0.23
PRKN-201ENST00000338468 PSMD2Q13200 908 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 LIN9Q5TKA1 542 aa16.49■□□□□ 0.23
PRKN-201ENST00000338468 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
PRKN-201ENST00000338468 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms