RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CCDC122Q5T0U0 273 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 SLC27A1Q6PCB7 646 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 LCLAT1Q6UWP7 414 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TOP6BLQ8N6T0 577 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 ALS2CR12Q96Q35 445 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 CRISPLD2Q9H0B8 497 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TUT1Q9H6E5 874 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 CSNK1G1Q9HCP0 422 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 ZDHHC18Q9NUE0 388 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 DUSP10Q9Y6W6 482 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TMEM191CA6NGB0 347 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 MOXD2PA6NHM9 499 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TMEM191BP0C7N4 346 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TRIM49P0CI25 452 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 TRIM49CP0CI26 452 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 ARF4P18085 180 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 GBP1P32455 592 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 FNTAP49354 379 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 RAD23BP54727 409 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 SPA17Q15506 151 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 ZBTB41Q5SVQ8 909 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 MAP1SQ66K74 1059 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 EFCAB12Q6NXP0 572 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 APBB1IPQ7Z5R6 666 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 PALB2Q86YC2 1186 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 SMG8Q8ND04 991 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 MNS1Q8NEH6 495 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 ARHGEF26Q96DR7 871 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 SDCBP2Q9H190 292 aa5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.75□□□□□ -1.49
PRPF4B-201ENST00000337659 DENND4AQ7Z401 1863 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CCDC66A2RUB6 948 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 FAM187AA6NFU0 413 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 H0YGN5 161 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 M0QZQ0 153 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SGPL1O95470 568 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CXCL10P02778 98 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 ADCYAP1R1P41586 468 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CHMP4BP1P59074 171 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 DHX34Q14147 1143 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 LHX8Q68G74 356 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CYP4F22Q6NT55 531 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 FBXO38Q6PIJ6 1188 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 TMEM110Q86TL2 294 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SLC4A11Q8NBS3 891 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 GSTCDQ8NEC7 633 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SPATA4Q8NEY3 305 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 OR5B17Q8NGF7 314 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 TEKT4Q8WW24 435 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 KHSRPQ92945 711 aaKnown RBP eCLIP5.74□□□□□ -1.497e-9■■■■□ 22.7
PRPF4B-201ENST00000337659 MMS19Q96T76 1030 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.74□□□□□ -1.493e-10■■□□□ 12
PRPF4B-201ENST00000337659 IRX2Q9BZI1 471 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 MMRN2Q9H8L6 949 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 FETUBQ9UGM5 382 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 NFS1Q9Y697 457 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 TRIP12Q14669 1992 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SCN1AP35498 2009 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SHOX2O60902 331 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 HSPA9P38646 679 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 GNG11P61952 73 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SLC25A11Q02978 314 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CRHR2Q13324 411 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 FRG1Q14331 258 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 ZNF268Q14587 947 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CNGA2Q16280 664 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 MTERF2Q49AM1 385 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 FAM109BQ6ICB4 259 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 GJB7Q6PEY0 223 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 LRIG3Q6UXM1 1119 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SEPT14Q6ZU15 432 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 ANKRD13CQ8N6S4 541 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 C3orf20Q8ND61 904 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 DEPTORQ8TB45 409 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 SLC35G2Q8TBE7 412 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 PAGR1Q9BTK6 254 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 INO80BQ9C086 356 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 EURLQ9NYK6 297 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 DOCK3Q8IZD9 2030 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 PCK1P35558 622 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 LIG4P49917 911 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 MNX1P50219 401 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 NRG1Q02297 640 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 DUOXA2Q1HG44 320 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 HABP4Q5JVS0 413 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 ZNF569Q5MCW4 686 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 DUPD1Q68J44 220 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 RUFY4Q6ZNE9 571 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 BHLHA9Q7RTU4 235 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 TLK2Q86UE8 772 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 VPS36Q86VN1 386 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 KBTBD7Q8WVZ9 684 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 PIK3R5Q8WYR1 880 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 COPS5Q92905 334 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 TMEM143Q96AN5 459 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 UROC1Q96N76 676 aa5.74□□□□□ -1.49
PRPF4B-201ENST00000337659 PNKPQ96T60 521 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms