RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 DSTYKQ6XUX3 929 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.55■□□□□ 0.24
SEC13-201ENST00000337354 DPH6Q7L8W6 267 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 TMC7Q7Z402 723 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 APPL2Q8NEU8 664 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 MAFAQ8NHW3 353 aaPredicted RBP16.55■□□□□ 0.24
SEC13-201ENST00000337354 HASPINQ8TF76 798 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 MRPL38Q96DV4 380 aaKnown RBP16.55■□□□□ 0.24
SEC13-201ENST00000337354 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 HERC2P3Q9BVR0 1158 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 VRTNQ9H8Y1 702 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 GDAP2Q9NXN4 497 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 COQ4Q9Y3A0 265 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 IRAK3Q9Y616 596 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 KCNJ18B7U540 433 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 PPEF2O14830 753 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 SPTLC1O15269 473 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 LPXNO60711 386 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
SEC13-201ENST00000337354 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 FGFR3P22607 806 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 IGFBP6P24592 240 aaPredicted RBP16.54■□□□□ 0.24
SEC13-201ENST00000337354 MTIF2P46199 727 aaKnown RBP16.54■□□□□ 0.24
SEC13-201ENST00000337354 BRCC3P46736 316 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 CAMK1Q14012 370 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 KCNJ12Q14500 433 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 IQCB1Q15051 598 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 TCP11X2Q5H9J9 407 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 DHX40Q8IX18 779 aaKnown RBP16.54■□□□□ 0.24
SEC13-201ENST00000337354 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 FBXL13Q8NEE6 735 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 MICAL1Q8TDZ2 1067 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 TCF25Q9BQ70 676 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 TTPALQ9BTX7 342 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 ZBP1Q9H171 429 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 MRPL17Q9NRX2 175 aaKnown RBP16.54■□□□□ 0.24
SEC13-201ENST00000337354 DSEQ9UL01 958 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 PCDHB8Q9UN66 801 aa16.54■□□□□ 0.24
SEC13-201ENST00000337354 LRRC10BA6NIK2 292 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 URODP06132 367 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
SEC13-201ENST00000337354 DNAJB1P25685 340 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 FMO5P49326 533 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 ERVFC1P60507 584 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 MYL6P60660 151 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 TPM4P67936 248 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 DSG1Q02413 1049 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 ADGRE1Q14246 886 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 SMC1AQ14683 1233 aaKnown RBP16.53■□□□□ 0.24
SEC13-201ENST00000337354 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 KIAA0319Q5VV43 1072 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 MRPL43Q8N983 215 aaKnown RBP16.53■□□□□ 0.24
SEC13-201ENST00000337354 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 FAM84AQ96KN4 292 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 SENP8Q96LD8 212 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 TUBGCP2Q9BSJ2 902 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 VN1R3Q9BXE9 311 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
SEC13-201ENST00000337354 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 XYLT2Q9H1B5 865 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.53■□□□□ 0.245e-7■□□□□ 8.4
SEC13-201ENST00000337354 RAB20Q9NX57 234 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 ATG2AQ2TAZ0 1938 aa16.53■□□□□ 0.24
SEC13-201ENST00000337354 CYB561D2O14569 222 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 FSCN2O14926 492 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 HUS1O60921 280 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 VNN1O95497 513 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CXCL14O95715 111 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 HLA-DRAP01903 254 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 TPM2P07951 284 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 ODC1P11926 461 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 ZNF18P17022 549 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 TYMPP19971 482 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 PIK3CAP42336 1068 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 GLUD2P49448 558 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CREMQ03060 361 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 WDR72Q3MJ13 1102 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 TAS1R1Q7RTX1 841 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 SPATA18Q8TC71 538 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 TAS1R2Q8TE23 839 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 PPM1EQ8WY54 764 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 PIK3R5Q8WYR1 880 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 CBX8Q9HC52 389 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 ENTPD7Q9NQZ7 604 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms