RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 METTL7BQ6UX53 244 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 MON1BQ7L1V2 547 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 DNERQ8NFT8 737 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 CGRRF1Q99675 332 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 LPIN3Q9BQK8 851 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 WNT8AQ9H1J5 351 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 ZWILCHQ9H900 591 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 FAM114A2Q9NRY5 505 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 CISHQ9NSE2 258 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
SNCA-201ENST00000336904 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 WDR90Q96KV7 1748 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 A0A087WZ62 844 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MIF4GDA9UHW6 222 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 MAPK13O15264 365 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 SHOX2O60902 331 aaPredicted RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 TMEM191BP0C7N4 346 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 CTNNA2P26232 953 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 ADCYAP1R1P41586 468 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 TARBP2Q15633 366 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 MAPK6Q16659 721 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 MREGQ8N565 214 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 CCDC33Q8N5R6 958 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 HVCN1Q96D96 273 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 C9orf72Q96LT7 481 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 FDXACB1Q9BRP7 624 aaPredicted RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 ADARB2Q9NS39 739 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 AKT3Q9Y243 479 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 PTPRFP10586 1907 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MAFO75444 373 aaPredicted RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 ECEL1O95672 775 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 ADCY8P40145 1251 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MDH1P40925 334 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 IREB2P48200 963 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 ZNF252P-AS1Q0IIN9 211 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 NEDD9Q14511 834 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 TAF5Q15542 800 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 AMHR2Q16671 573 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 KYNUQ16719 465 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 DENND2CQ68D51 928 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 CYP4F22Q6NT55 531 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 GSTA5Q7RTV2 222 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 ABRAQ8N0Z2 381 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 NAP1L3Q99457 506 aaPredicted RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 ACO2Q99798 780 aaKnown RBP9.41□□□□□ -0.9
SNCA-201ENST00000336904 IMPG2Q9BZV3 1241 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 GINM1Q9NU53 330 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 HES2Q9Y543 173 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 IVNS1ABPQ9Y6Y0 642 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MGAMO43451 1857 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
SNCA-201ENST00000336904 MKI67P46013 3256 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 OTOFQ9HC10 1997 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 GPR25O00155 361 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 HCRTO43612 131 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 IFNB1P01574 187 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 CHRNA3P32297 505 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 ITGA8P53708 1063 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 ZNF699Q32M78 642 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 DENND1BQ6P3S1 775 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 DCUN1D2Q6PH85 259 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 TAX1BP1Q86VP1 789 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 SLC17A8Q8NDX2 589 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 UBA3Q8TBC4 463 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 RUBCNQ92622 972 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 RPS6KC1Q96S38 1066 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 RASAL2Q9UJF2 1139 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 MTUS1Q9ULD2 1270 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 IGKV6D-21A0A0A0MT36 114 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 A0A0G2JLL6 359 aaPredicted RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 TP73O15350 636 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 FAM189A1O60320 539 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 ITGB3P05106 788 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 IVLP07476 585 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 INSRRP14616 1297 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 ICAM3P32942 547 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 GAD2Q05329 585 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 GLRA4Q5JXX5 417 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 PRAMEF19Q5SWL8 479 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 CELF3Q5SZQ8 465 aaKnown RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 KDM7AQ6ZMT4 941 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 PRRT2Q7Z6L0 340 aaPredicted RBP9.4□□□□□ -0.9
SNCA-201ENST00000336904 JOSD2Q8TAC2 188 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 AFG1LQ8WV93 481 aa9.4□□□□□ -0.9
SNCA-201ENST00000336904 APOL6Q9BWW8 343 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms