RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 MRPL1Q9BYD6 325 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ARMC7Q9H6L4 198 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 SLC7A8Q9UHI5 535 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 LAMB4A4D0S4 1761 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ARFGEF2Q9Y6D5 1785 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PEX1O43933 1283 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PABPC4LP0CB38 370 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 VCLP18206 1134 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PDIA2Q13087 525 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 C16orf72Q14CZ0 275 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 B3GNT6Q6ZMB0 384 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 GLIS1Q8NBF1 620 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 RNF169Q8NCN4 708 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF564Q8TBZ8 553 aaPredicted RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 C7orf43Q8WVR3 580 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 LRRC27Q9C0I9 530 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ANLNQ9NQW6 1124 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 C15orf38-AP3S2A0A0A6YYH1 394 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 NPEPPSP55786 919 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PPIDQ08752 370 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 TCHHL1Q5QJ38 904 aaPredicted RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ARPINQ7Z6K5 226 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 ULK2Q8IYT8 1036 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 PTCD3Q96EY7 689 aaKnown RBP11.69□□□□□ -0.54
SEC23B-202ENST00000336714 USP29Q9HBJ7 922 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 SPEF2Q9C093 1822 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 ITIH2P19823 946 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 NMT1P30419 496 aaKnown RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 STT3AP46977 705 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 C6orf183Q5T699 404 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 DPY19L2P1Q6NXN4 242 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 ARHGAP24Q8N264 748 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 NCSTNQ92542 709 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 MANSC1Q9H8J5 431 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 MROH5Q6ZUA9 1318 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 ZMYM2Q9UBW7 1377 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 PDLIM1O00151 329 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 NDUFB5O43674 189 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 KLRK1P26718 216 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 JAM2P57087 298 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 MECOMQ03112 1051 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 DCTN2Q13561 401 aaKnown RBP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 SYDE2Q5VT97 1194 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 GALNT4Q8N4A0 578 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 AGPAT1Q99943 283 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 MECRQ9BV79 373 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 OSBPL8Q9BZF1 889 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
SEC23B-202ENST00000336714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
SEC23B-202ENST00000336714 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 MIF4GDA9UHW6 222 aaKnown RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 H3BSA7 217 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 TRAFD1O14545 582 aaPredicted RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 VILLO15195 856 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 NFKBIAP25963 317 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 PMLP29590 882 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 ALDH1B1P30837 517 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 SSTR1P30872 391 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 RXRGP48443 463 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 GPC5P78333 572 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 UBAP2LQ14157 1087 aaKnown RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 STAT4Q14765 748 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 CCDC92Q53HC0 331 aaPredicted RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 COBLL1Q53SF7 1204 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 DGCR14Q96DF8 476 aaKnown RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 MTMR9Q96QG7 549 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 CSRNP1Q96S65 589 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
SEC23B-202ENST00000336714 DCUN1D5Q9BTE7 237 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 TRAIPQ9BWF2 469 aa11.67□□□□□ -0.54
SEC23B-202ENST00000336714 PLVAPQ9BX97 442 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms