RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 KRT10P13645 584 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ABL2P42684 1182 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 KCNJ2P63252 427 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ARHGEF18Q6ZSZ5 1173 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 MCOLN2Q8IZK6 566 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 GPD1LQ8N335 351 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 PITPNM3Q9BZ71 974 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.51■□□□□ 0.393e-8■■□□□ 11.5
CDC42EP4-201ENST00000335793 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 FSCN2O14926 492 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 TUBP50607 506 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 CCDC89Q8N998 374 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 OSBPL8Q9BZF1 889 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 PPP1R12CQ9BZL4 782 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZFATQ9P243 1243 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 C2CD2Q9Y426 696 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 LRRIQ4A6NIV6 560 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 TLR3O15455 904 aaKnown RBP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 DNAJC8O75937 253 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 PCK1P35558 622 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 P3H1Q32P28 736 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 ACSF2Q96CM8 615 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 RBM15Q96T37 977 aaKnown RBP eCLIP17.5■□□□□ 0.393e-7■■■□□ 14.9
CDC42EP4-201ENST00000335793 CORO1CQ9ULV4 474 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 NAALADL1Q9UQQ1 740 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 GOLGA8SH3BPF8 625 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 GOLGA8MH3BSY2 632 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 RNF8O76064 485 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 MAN1A1P33908 653 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 CYP24A1Q07973 514 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 STRN3Q13033 797 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 DCUN1D2Q6PH85 259 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 NINJ2Q9NZG7 142 aa17.5■□□□□ 0.39
CDC42EP4-201ENST00000335793 GPC3P51654 580 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 SIX1Q15475 284 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 CYP1B1Q16678 543 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 SEZ6Q53EL9 994 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 C4orf19Q8IY42 314 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 CYP4X1Q8N118 509 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 SLC17A8Q8NDX2 589 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 FAM81AQ8TBF8 368 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 BSNDQ8WZ55 320 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 HERPUD2Q9BSE4 406 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 PNMA3Q9UL41 463 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 AGAP1Q9UPQ3 857 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 PCDHB2Q9Y5E7 798 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 PCDHA10Q9Y5I2 948 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 CCNE2O96020 404 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 BAATQ14032 418 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANO5Q75V66 913 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 C12orf56Q8IXR9 622 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 C10orf71Q711Q0 1435 aa17.49■□□□□ 0.39
CDC42EP4-201ENST00000335793 AHCYL1O43865 530 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZBED4O75132 1171 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 FESP07332 822 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 JAK3P52333 1124 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 FKBP1AP62942 108 aaKnown RBP17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 B3GNT9Q6UX72 402 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 RHOT1Q8IXI2 618 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 EBF2Q9HAK2 575 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 AAASQ9NRG9 546 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 CDH16O75309 829 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 HLA-DRAP01903 254 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 GNA15P30679 374 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 DYNLT1P63172 113 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 KRT76Q01546 638 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 DBN1Q16643 649 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 FAM81BQ96LP2 452 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 TRIM33Q9UPN9 1127 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ARL2BPQ9Y2Y0 163 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 LRRD1A4D1F6 860 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ATP6V1G1O75348 118 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 OATP04181 439 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZSCAN5DPP0CG00 497 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 HSD17B4P51659 736 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 BPIFB4P59827 614 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 IL9RQ01113 521 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 PGM5Q15124 567 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 MAP4K3Q8IVH8 894 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 C4orf33Q8N1A6 199 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 YIPF2Q9BWQ6 316 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 UBIAD1Q9Y5Z9 338 aa17.48■□□□□ 0.39
CDC42EP4-201ENST00000335793 MTA2O94776 668 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 DNAJC3Q13217 504 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 SETDB1Q15047 1291 aa17.47■□□□□ 0.39
CDC42EP4-201ENST00000335793 RNF220Q5VTB9 566 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms