RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 B4GALNT2Q8NHY0 566 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 EZH1Q92800 747 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 CBWD1Q9BRT8 395 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 SEL1LQ9UBV2 794 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 USTQ9Y2C2 406 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 CAPN9O14815 690 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 GYG2O15488 501 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 SORBS3O60504 671 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 GAS7O60861 476 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 CALCAP01258 141 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 CYP1A2P05177 515 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 BMP3P12645 472 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 ERFP50548 548 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 MOGSQ13724 837 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 DSTYKQ6XUX3 929 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 RFX8Q6ZV50 586 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 ENDOVQ8N8Q3 282 aaKnown RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 SCG3Q8WXD2 468 aaKnown RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 MAML1Q92585 1016 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 SLCO2A1Q92959 643 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 VTI1AQ96AJ9 217 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 HSD17B14Q9BPX1 270 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 HERPUD2Q9BSE4 406 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 KIAA1586Q9HCI6 787 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 ATP9AO75110 1047 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SHMT1P34896 483 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SREBF1P36956 1147 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 MFAP3P55082 362 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 NR1H3Q13133 447 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SLC1A5Q15758 541 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 PDK4Q16654 411 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 LVRNQ6Q4G3 990 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 GALNT15Q8N3T1 639 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 FGD4Q96M96 766 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 RMI1Q9H9A7 625 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 ALG13Q9NP73 1137 aaKnown RBP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 NOCTQ9UK39 431 aaKnown RBP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 USP20Q9Y2K6 914 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 ABLIM1O14639 778 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 KRT36O76013 467 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 MTA2O94776 668 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 POTEJP0CG39 1038 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 CYP11B1P15538 503 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 KCNA3P22001 575 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 KAZNQ674X7 775 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 IRGCQ6NXR0 463 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 OTOAQ7RTW8 1153 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 NACC1Q96RE7 527 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 FZD1Q9UP38 647 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 LRCH1Q9Y2L9 728 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 DDX39AO00148 427 aaKnown RBP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 CFBP00751 764 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 R3HDM1Q15032 1099 aaKnown RBP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 NFIL3Q16649 462 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 PCNX4Q63HM2 1172 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 C4orf50Q6ZRC1 276 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 FAM71AQ8IYT1 594 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 KIFAP3Q92845 792 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 GBP5Q96PP8 586 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 PKD2L1Q9P0L9 805 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
SYNE3-201ENST00000334258 NEU2Q9Y3R4 380 aa14.53□□□□□ -0.08
SYNE3-201ENST00000334258 SLX4Q8IY92 1834 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 CCDC22O60826 627 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 CETN2P41208 172 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 BAG6P46379 1132 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 KPNB1Q14974 876 aaKnown RBP14.52□□□□□ -0.08
SYNE3-201ENST00000334258 DACT2Q5SW24 774 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 RIBC1Q8N443 379 aaPredicted RBP14.52□□□□□ -0.08
SYNE3-201ENST00000334258 C10orf82Q8WW14 230 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 ZNF333Q96JL9 665 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 KREMEN1Q96MU8 473 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 ZNF148Q9UQR1 794 aa14.52□□□□□ -0.08
SYNE3-201ENST00000334258 ATAD5Q96QE3 1844 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 TCEAL1Q15170 157 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 SGSM1Q2NKQ1 1148 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 SYDE2Q5VT97 1194 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 CLNKQ7Z7G1 428 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 DHX38Q92620 1227 aaKnown RBP14.52□□□□□ -0.09
SYNE3-201ENST00000334258 ZNF75CPQ92670 426 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-201ENST00000334258 FAM163AQ96GL9 167 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-201ENST00000334258 TMEM117Q9H0C3 514 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 TUFT1Q9NNX1 390 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 GRID1Q9ULK0 1009 aa14.52□□□□□ -0.09
SYNE3-201ENST00000334258 A0A1W2PPM1 405 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 GOLGA8RI6L899 631 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PIAS1O75925 651 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 HAUS5O94927 633 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 RTN3O95197 1032 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 KRT4P19013 534 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PIK3CAP42336 1068 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 CACNA2D1P54289 1103 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 JAG1P78504 1218 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 SLC45A4Q5BKX6 768 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 LLGL2Q6P1M3 1020 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 C15orf52Q6ZUT6 534 aaKnown RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 SH3BP5LQ7L8J4 393 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 OTOP1Q7RTM1 612 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PODNQ7Z5L7 613 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms