RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZNF606Q8WXB4 792 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ZBTB10Q96DT7 871 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 FZD8Q9H461 694 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 MRPL47Q9HD33 250 aaKnown RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 PTPRHQ9HD43 1115 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX28-201ENST00000332395 GRIN2DO15399 1336 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ASB14A6NK59 587 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 HOXC6P09630 235 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 CYP2C8P10632 490 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 GBP1P32455 592 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ATP1A2P50993 1020 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 C1QBPQ07021 282 aaKnown RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 PTP4A2Q12974 167 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 SNAPC2Q13487 334 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ZNF568Q3ZCX4 644 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 SPDYCQ5MJ68 293 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 PLEKHA7Q6IQ23 1121 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 NIF3L1Q9GZT8 377 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 CENPHQ9H3R5 247 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 LRRC19Q9H756 370 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 PTPN22Q9Y2R2 807 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 B4GALT5O43286 388 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 KCNJ1P48048 391 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 TFAMQ00059 246 aaKnown RBP18.51■□□□□ 0.55
DDX28-201ENST00000332395 SGSM1Q2NKQ1 1148 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 EMC10Q5UCC4 262 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 ARMCX2Q7L311 632 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 THNSL1Q8IYQ7 743 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 DDX27Q96GQ7 796 aaKnown RBP18.51■□□□□ 0.55
DDX28-201ENST00000332395 SCINQ9Y6U3 715 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 A6NNZ2 444 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 EIF3HO15372 352 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX28-201ENST00000332395 PPFIA4O75335 1185 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 CD58P19256 250 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 TRPC3Q13507 836 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 TMEM132AQ24JP5 1023 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 TUBB8Q3ZCM7 444 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 DAB2IPQ5VWQ8 1189 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 TTC19Q6DKK2 380 aaPredicted RBP18.51■□□□□ 0.55
DDX28-201ENST00000332395 RUFY4Q6ZNE9 571 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 PACS2Q86VP3 889 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 RNPEPQ9H4A4 650 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 CISHQ9NSE2 258 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 PARP2Q9UGN5 583 aa18.51■□□□□ 0.55
DDX28-201ENST00000332395 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 ECEL1O95672 775 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 TMEM191BP0C7N4 346 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 OSTNP61366 133 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 MBTD1Q05BQ5 628 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 LDLRAD1Q5T700 205 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 EEF1DP3Q658K8 133 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 ICE2Q659A1 982 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 CDR2LQ86X02 465 aaPredicted RBP18.5■□□□□ 0.55
DDX28-201ENST00000332395 CEP120Q8N960 986 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.5■□□□□ 0.55
DDX28-201ENST00000332395 C1orf54Q8WWF1 131 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 SYT17Q9BSW7 474 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 MINDY3Q9H8M7 445 aa18.5■□□□□ 0.55
DDX28-201ENST00000332395 C22orf31O95567 290 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 ARHGAP1Q07960 439 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 PDCLQ13371 301 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 PPM1EQ8WY54 764 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 PARVAQ9NVD7 372 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 PNMA3Q9UL41 463 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 TLR3O15455 904 aaKnown RBP18.49■□□□□ 0.55
DDX28-201ENST00000332395 ASAP2O43150 1006 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 PSTPIP1O43586 416 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 B4GALT4O60513 344 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 MMP8P22894 467 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 ZNF699Q32M78 642 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 ZNF394Q53GI3 561 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 EAPPQ56P03 285 aaPredicted RBP18.49■□□□□ 0.55
DDX28-201ENST00000332395 GJC2Q5T442 439 aaPredicted RBP18.49■□□□□ 0.55
DDX28-201ENST00000332395 RHOT1Q8IXI2 618 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 MAIP1Q8WWC4 291 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 SLCO2A1Q92959 643 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 HERPUD2Q9BSE4 406 aa18.49■□□□□ 0.55
DDX28-201ENST00000332395 O00370 1275 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 TNNC2P02585 160 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 IQCF3P0C7M6 154 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 BRD2P25440 801 aaKnown RBP18.48■□□□□ 0.55
DDX28-201ENST00000332395 PMS2P54278 862 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 TAS2R40P59535 323 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 IGBP1P78318 339 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 FEZF2Q8TBJ5 459 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 ANKRD36BP1Q96IX9 119 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 XYLT2Q9H1B5 865 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 CDT1Q9H211 546 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 EPB41L4BQ9H329 900 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 PABPC3Q9H361 631 aaKnown RBP18.48■□□□□ 0.55
DDX28-201ENST00000332395 MTRF1LQ9UGC7 380 aaKnown RBP18.48■□□□□ 0.55
DDX28-201ENST00000332395 TNFSF13BQ9Y275 285 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 EVPLQ92817 2033 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 ANK1P16157 1881 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 GJB6O95452 261 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms