RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 RTP2Q5QGT7 225 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 CEP57Q86XR8 500 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 AOPEPQ8N6M6 819 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 MICAL1Q8TDZ2 1067 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 ELMO3Q96BJ8 720 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 HPDLQ96IR7 371 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 ZNF560Q96MR9 790 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 GAS2L1Q99501 681 aaPredicted RBP27.95■■■□□ 2.07
SMDT1-201ENST00000331479 BPIFA3Q9BQP9 254 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 FANCLQ9NW38 375 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 STK39Q9UEW8 545 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 FGFR3P22607 806 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 PNPLA4P41247 253 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 ZNF165P49910 485 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 MYL6P60660 151 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 NCOA4Q13772 614 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 SV2CQ496J9 727 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 KIAA0319Q5VV43 1072 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 DHX40Q8IX18 779 aaKnown RBP27.94■■■□□ 2.06
SMDT1-201ENST00000331479 TAS1R2Q8TE23 839 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 MYO7AQ13402 2215 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 HIDE1A8MVS5 230 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 KPNA7A9QM74 516 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 M0QZQ0 153 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 C2CD2LO14523 706 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 POU3F3P20264 500 aaPredicted RBP27.94■■■□□ 2.06
SMDT1-201ENST00000331479 TRPC3Q13507 836 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 KRT39Q6A163 491 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 DSTYKQ6XUX3 929 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 SENP8Q96LD8 212 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 TTPALQ9BTX7 342 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 XYLT2Q9H1B5 865 aa27.94■■■□□ 2.06
SMDT1-201ENST00000331479 R3HCC1Q9Y3T6 440 aaKnown RBP27.94■■■□□ 2.06
SMDT1-201ENST00000331479 STX10O60499 249 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 LILRB3O75022 631 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 LRRN2O75325 713 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 CXCL14O95715 111 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 GLUD2P49448 558 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 MXI1P50539 228 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 DSG1Q02413 1049 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 PTPN14Q15678 1187 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 CDKAL1Q5VV42 579 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 KIAA1841Q6NSI8 718 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.93■■■□□ 2.06
SMDT1-201ENST00000331479 LMCD1Q9NZU5 365 aa27.93■■■□□ 2.06
SMDT1-201ENST00000331479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.93■■■□□ 2.06
SMDT1-201ENST00000331479 TIMM13Q9Y5L4 95 aaPredicted RBP27.93■■■□□ 2.06
SMDT1-201ENST00000331479 HLA-DRAP01903 254 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 URODP06132 367 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 KCNH2Q12809 1159 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 FAM114A1Q8IWE2 563 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 MRPL43Q8N983 215 aaKnown RBP27.92■■■□□ 2.06
SMDT1-201ENST00000331479 RIN2Q8WYP3 895 aaPredicted RBP27.92■■■□□ 2.06
SMDT1-201ENST00000331479 HSD3B7Q9H2F3 369 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 NGRNQ9NPE2 291 aaKnown RBP27.92■■■□□ 2.06
SMDT1-201ENST00000331479 PCDHB8Q9UN66 801 aa27.92■■■□□ 2.06
SMDT1-201ENST00000331479 C2orf71A6NGG8 1288 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 KCNJ18B7U540 433 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 CYB561D2O14569 222 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 CA8P35219 290 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 PIK3CAP42336 1068 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 MTIF2P46199 727 aaKnown RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 FMO5P49326 533 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 MYO1EQ12965 1108 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 KCNJ12Q14500 433 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 SMC1AQ14683 1233 aaKnown RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 IQCB1Q15051 598 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 PRSS55Q6UWB4 352 aaPredicted RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 ADGRD2Q7Z7M1 963 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 SEMA4DQ92854 862 aa27.91■■■□□ 2.06
SMDT1-201ENST00000331479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.91■■■□□ 2.062e-6■■■□□ 19.2
SMDT1-201ENST00000331479 MRPL17Q9NRX2 175 aaKnown RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 MAGEC2Q9UBF1 373 aaPredicted RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 PRRC2BQ5JSZ5 2229 aaKnown RBP27.91■■■□□ 2.06
SMDT1-201ENST00000331479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.9■■■□□ 2.06
SMDT1-201ENST00000331479 SYN3O14994 580 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 PAX3P23760 479 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 TCP11X2Q5H9J9 407 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 PDE12Q6L8Q7 609 aaKnown RBP27.9■■■□□ 2.06
SMDT1-201ENST00000331479 LNX1Q8TBB1 728 aaPredicted RBP27.9■■■□□ 2.06
SMDT1-201ENST00000331479 PI4K2AQ9BTU6 479 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 GDAP2Q9NXN4 497 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 SNX9Q9Y5X1 595 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 ATICP31939 592 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 VARS2Q5ST30 1063 aaKnown RBP27.9■■■□□ 2.06
SMDT1-201ENST00000331479 LRSAM1Q6UWE0 723 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 PIK3R5Q8WYR1 880 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 CBX8Q9HC52 389 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 IRAK3Q9Y616 596 aa27.9■■■□□ 2.06
SMDT1-201ENST00000331479 STAU1O95793 577 aaKnown RBP27.89■■■□□ 2.05
SMDT1-201ENST00000331479 FOSL2P15408 326 aa27.89■■■□□ 2.05
SMDT1-201ENST00000331479 ZNF699Q32M78 642 aa27.89■■■□□ 2.05
SMDT1-201ENST00000331479 SPOPLQ6IQ16 392 aa27.89■■■□□ 2.05
SMDT1-201ENST00000331479 VRTNQ9H8Y1 702 aa27.89■■■□□ 2.05
SMDT1-201ENST00000331479 COQ4Q9Y3A0 265 aa27.89■■■□□ 2.05
SMDT1-201ENST00000331479 ASS1P00966 412 aaKnown RBP27.88■■■□□ 2.05
SMDT1-201ENST00000331479 AFPP02771 609 aaKnown RBP27.88■■■□□ 2.05
SMDT1-201ENST00000331479 ODC1P11926 461 aa27.88■■■□□ 2.05
SMDT1-201ENST00000331479 MRPL58Q14197 206 aaKnown RBP27.88■■■□□ 2.05
SMDT1-201ENST00000331479 BMS1Q14692 1282 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms