RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 FBXW10Q5XX13 1052 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 IFT81Q8WYA0 676 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 THAP2Q9H0W7 228 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 ITGA4P13612 1032 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 CTNNA2P26232 953 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 OR1G1P47890 313 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 TM4SF4P48230 202 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 MMS22LQ6ZRQ5 1243 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 HACE1Q8IYU2 909 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 BAP1Q92560 729 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 AP1M1Q9BXS5 423 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 ADAM22Q9P0K1 906 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 CNOT8Q9UFF9 292 aaKnown RBP16.93■□□□□ 0.3
PDGFB-201ENST00000331163 TUBGCP4Q9UGJ1 667 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 MTUS1Q9ULD2 1270 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 ZBTB42B2RXF5 422 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 M0QYV0 167 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 GHRHRQ02643 423 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 DNAJC7Q99615 494 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 AGPAT1Q99943 283 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 SMYD3Q9H7B4 428 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
PDGFB-201ENST00000331163 SAR1BQ9Y6B6 198 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 HCRTO43612 131 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 ACLYP53396 1101 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 OR6B2Q6IFH4 312 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
PDGFB-201ENST00000331163 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
PDGFB-201ENST00000331163 PPP1R37O75864 691 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 PSD3Q9NYI0 1048 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 PCSK1NQ9UHG2 260 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 GAS2O43903 313 aaKnown RBP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 TSPAN1O60635 241 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 ZC3H11AO75152 810 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 ATF7P17544 494 aaPredicted RBP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 GGCXP38435 758 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 EFCAB13Q8IY85 973 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 KREMEN1Q96MU8 473 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 HEMGNQ9BXL5 484 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 CISHQ9NSE2 258 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 PPEF2O14830 753 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 LGR5O75473 907 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 P4HA1P13674 534 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 DYNLT1P63172 113 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 SLC18A3Q16572 532 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 CCDC170Q8IYT3 715 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 ARRDC4Q8NCT1 418 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 C1orf131Q8NDD1 294 aaKnown RBP16.91■□□□□ 0.3
PDGFB-201ENST00000331163 PDZD7Q9H5P4 517 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 HESX1Q9UBX0 185 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 NAGPAQ9UK23 515 aa16.91■□□□□ 0.3
PDGFB-201ENST00000331163 UBE4BO95155 1302 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 ZNF263O14978 683 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 F2P00734 622 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
PDGFB-201ENST00000331163 LBX1P52954 281 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 ATP11AP98196 1134 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 CUL2Q13617 745 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 GANQ9H2C0 597 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
PDGFB-201ENST00000331163 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 HUS1O60921 280 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 HIC1Q14526 733 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 NOP9Q86U38 636 aaKnown RBP16.9■□□□□ 0.3
PDGFB-201ENST00000331163 BRSK2Q8IWQ3 736 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 SCN4BQ8IWT1 228 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 BCAS4Q8TDM0 211 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 PADI3Q9ULW8 664 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 EBAG9O00559 213 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
PDGFB-201ENST00000331163 C2orf54Q08AI8 447 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 SNX1Q13596 522 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
PDGFB-201ENST00000331163 NTPCRQ9BSD7 190 aaKnown RBP16.9■□□□□ 0.3
PDGFB-201ENST00000331163 GOLGA6CA6NDK9 693 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 GOLGA6DP0CG33 693 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 CYP11B1P15538 503 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ATP1A2P50993 1020 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 ZPBP2Q6X784 338 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 FAM76AQ8TAV0 307 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 OSBPL7Q9BZF2 842 aa16.89■□□□□ 0.29
PDGFB-201ENST00000331163 DMAC2Q9NW81 257 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms