RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CTC1Q2NKJ3 1217 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 MOXD1Q6UVY6 613 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 RELL1Q8IUW5 271 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 MYCT1Q8N699 235 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 PLVAPQ9BX97 442 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
CLSTN3-202ENST00000331148 TJP3O95049 919 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 ABHD2P08910 425 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 BFSP1Q12934 665 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 DYNC1I2Q13409 638 aaKnown RBP19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 RINT1Q6NUQ1 792 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 LRRC74BQ6ZQY2 392 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 CLNKQ7Z7G1 428 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 GMCL1P1Q8NEA9 526 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 DCLK3Q9C098 648 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 TRABDQ9H4I3 376 aa19.19■□□□□ 0.66
CLSTN3-202ENST00000331148 F5H6K3 240 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 C2CD2LO14523 706 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 SGPL1O95470 568 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 EGFRP00533 1210 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 RRM1P23921 792 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 GCAP28676 217 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 SLC18A1P54219 525 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 ARHGAP4P98171 946 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 CYP4F22Q6NT55 531 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 OTOAQ7RTW8 1153 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 MTDHQ86UE4 582 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 CDAN1Q8IWY9 1227 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 ZNF653Q96CK0 615 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 FAM210AQ96ND0 272 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 PGAP2Q9UHJ9 254 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 SMG5Q9UPR3 1016 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 NUMBLQ9Y6R0 609 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 EXOC1LA0A1B0GW35 172 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 MAGEA13PA6NCF6 341 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 TBX3O15119 743 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 GZMAP12544 262 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 SLC34A1Q06495 639 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 TNFAIP1Q13829 316 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 ZRSR2Q15696 482 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 ACSBG2Q5FVE4 666 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 NSMFQ6X4W1 530 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 NOP9Q86U38 636 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 EPS8L1Q8TE68 723 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 GLT8D2Q9H1C3 349 aa19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 NOCTQ9UK39 431 aaKnown RBP19.18■□□□□ 0.66
CLSTN3-202ENST00000331148 CAPN9O14815 690 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 RPA3P35244 121 aaPredicted RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 RASA3Q14644 834 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 KPNB1Q14974 876 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 SAMD7Q7Z3H4 446 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 MAIP1Q8WWC4 291 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 GATA6Q92908 595 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 LENG9Q96B70 501 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 HERPUD2Q9BSE4 406 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 FAM192AQ9GZU8 254 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 NPHS2Q9NP85 383 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 METTL5Q9NRN9 209 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 GTF3C4Q9UKN8 822 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 STK24Q9Y6E0 443 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 EXOC3O60645 756 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 CCDC22O60826 627 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 PYGLP06737 847 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 SLC1A5Q15758 541 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 IZUMO3Q5VZ72 239 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 C4orf33Q8N1A6 199 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 CRYGNQ8WXF5 182 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 VTI1AQ96AJ9 217 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 RBM41Q96IZ5 413 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 UVRAGQ9P2Y5 699 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 SYNPO2Q9UMS6 1093 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 R3HDM2Q9Y2K5 976 aaKnown RBP19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 NEU2Q9Y3R4 380 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 UBE4BO95155 1302 aa19.17■□□□□ 0.66
CLSTN3-202ENST00000331148 PSMG1O95456 288 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 FGFR1P11362 822 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 MAGEA4P43358 317 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 SERPINB4P48594 390 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 MAP3K10Q02779 954 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 AP1B1Q10567 949 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 PKN2Q16513 984 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 Q4G0T1 1027 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 FYB2Q5VWT5 728 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 SESTD1Q86VW0 696 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 CCNJLQ8IV13 435 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 ATL2Q8NHH9 583 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 GMCL1Q96IK5 515 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 GBP5Q96PP8 586 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 SMC6Q96SB8 1091 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 BTBD10Q9BSF8 475 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 PDP2Q9P2J9 529 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 VAV3Q9UKW4 847 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 ZNF541Q9H0D2 1346 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms