RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GH1P01241 217 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 PSAPP07602 524 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 CFHP08603 1231 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 DSG3P32926 999 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 TRIM72Q6ZMU5 477 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 TBC1D1Q86TI0 1168 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 KATNAL2Q8IYT4 538 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 GEMIN8Q9NWZ8 242 aaKnown RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 H0YCG3 227 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 FDX1P10109 184 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 CETPP11597 493 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 SSR1P43307 286 aaKnown RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 WNT7BP56706 349 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 NOMO3P69849 1222 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 ARHGEF18Q6ZSZ5 1173 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 RELL1Q8IUW5 271 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 TCP11Q8WWU5 503 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 VCPIP1Q96JH7 1222 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 POLR3FQ9H1D9 316 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-201ENST00000330045 CYP26B1Q9NR63 512 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 RNF146Q9NTX7 359 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 BAIAP2L1Q9UHR4 511 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 RIPK3Q9Y572 518 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 CLTAP09496 248 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 KCNA2P16389 499 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 STX2P32856 288 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 ABCD1P33897 745 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GJC1P36383 396 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 ACOT2P49753 483 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 NLRP11P59045 1033 aaKnown RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 SP4Q02446 784 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 STAT4Q14765 748 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GSTA5Q7RTV2 222 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 SPATA21Q7Z572 469 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 EXD1Q8NHP7 514 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 TGS1Q96RS0 853 aaKnown RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 TACO1Q9BSH4 297 aaKnown RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GSTTP1A0A1W2PQM5 241 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 VWA5AO00534 786 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 VNN1O95497 513 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PTPRAP18433 802 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 CD58P19256 250 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GNA15P30679 374 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 SSTR3P32745 418 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PRKCEQ02156 737 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 CUL2Q13617 745 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 NEDD9Q14511 834 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PLEKHA7Q6IQ23 1121 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 SRRM1Q8IYB3 904 aaKnown RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 GPATCH11Q8N954 259 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 NKIRAS1Q9NYS0 192 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
BRCC3-201ENST00000330045 ARL2BPQ9Y2Y0 163 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 TELO2Q9Y4R8 837 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 SCINQ9Y6U3 715 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
BRCC3-201ENST00000330045 TLR3O15455 904 aaKnown RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 EZRP15311 586 aaKnown RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 KLRC2P26717 231 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 HMGCS2P54868 508 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 STRN3Q13033 797 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 MKRN3Q13064 507 aaKnown RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 ANKS1BQ7Z6G8 1248 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 CCDC60Q8IWA6 550 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 SCYL3Q8IZE3 742 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 PLCD4Q9BRC7 762 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 ACTL7BQ9Y614 415 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 KIAA1217Q5T5P2 1943 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 PTPRJQ12913 1337 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 PEX10O60683 326 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 GJB6O95452 261 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 CETN2P41208 172 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 NCALDP61601 193 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 LMNB2Q03252 620 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 E2F5Q15329 346 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 P3H1Q32P28 736 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms