RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 FAM170AA1A519 330 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 MSCO60682 206 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 PRLRP16471 622 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 DISP2A7MBM2 1401 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 EEF2KO00418 725 aaKnown RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ACSL3O95573 720 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CYP3A7P24462 503 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 FNTAP49354 379 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ACAD11Q709F0 780 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RRP15Q9Y3B9 282 aaKnown RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RASA4BC9J798 803 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RASA4O43374 803 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 KPNA1P52294 538 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RAB42Q8N4Z0 105 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CDCA5Q96FF9 252 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 GPRC5DQ9NZD1 345 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ZMYND10O75800 440 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 GYPCP04921 128 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 RPL10AP62906 217 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 PDK2Q15119 407 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 HIF1AQ16665 826 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 AP1ARQ63HQ0 302 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 ATP6V0D2Q8N8Y2 350 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 DYRK4Q9NR20 520 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 SUN2Q9UH99 717 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 TOMM70O94826 608 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 AGTP01019 485 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 IFNAR2P48551 515 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 SLC7A5Q01650 507 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM67Q6ZTA4 783 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 RASSF3Q86WH2 238 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 GIPC2Q8TF65 315 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 POLD4Q9HCU8 107 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 PTPRAP18433 802 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 CDKAL1Q5VV42 579 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 LMBRD2Q68DH5 695 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 RPAINQ86UA6 219 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 CCNJLQ8IV13 435 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 CTSHP09668 335 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 SLC9A1P19634 815 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 PRAMEP78395 509 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 MCL1Q07820 350 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 CYP24A1Q07973 514 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 ZDHHC17Q8IUH5 632 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 MMGT1Q8N4V1 131 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 MCUQ8NE86 351 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 ROPN1BQ9BZX4 212 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 ROPN1Q9HAT0 212 aaPredicted RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 FAM237AA0A1B0GTK4 181 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A5-201ENST00000328300 TDRD10Q5VZ19 366 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 GPAT2Q6NUI2 795 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 GANCQ8TET4 914 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 ASIC4Q96FT7 647 aa12□□□□□ -0.49
COL4A5-201ENST00000328300 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
COL4A5-201ENST00000328300 LMNAP02545 664 aaKnown RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 ARSEP51690 589 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 FBXO38Q6PIJ6 1188 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PARD3BQ8TEW8 1205 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 DDX47Q9H0S4 455 aaKnown RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 ST8SIA6P61647 398 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PPP2R2AP63151 447 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 LINC00523Q86TU6 105 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 NFIBO00712 420 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 FDFT1P37268 417 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PID1Q7Z2X4 250 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 ZNF135P52742 658 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PDE1CQ14123 709 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-201ENST00000328300 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 NCK2O43639 380 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 BCAT1P54687 386 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 PLD1Q13393 1074 aa11.99□□□□□ -0.49
COL4A5-201ENST00000328300 MRPL9Q9BYD2 267 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms