RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 GPNMBQ14956 572 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 ASIC2Q16515 512 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 ASTE1Q2TB18 679 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 HDXQ7Z353 690 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 HACE1Q8IYU2 909 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 KIF12Q96FN5 646 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 IMPG2Q9BZV3 1241 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 C11orf49Q9H6J7 331 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 NHEJ1Q9H9Q4 299 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 SMIM28A0A1B0GU29 152 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 NBNO60934 754 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 LCA5LO95447 670 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 TBXAS1P24557 533 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 ANXA13P27216 316 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 ATICP31939 592 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 MYL6P60660 151 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 TRPC3Q13507 836 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 TRIM60Q495X7 471 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 MMS22LQ6ZRQ5 1243 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 KAT5Q92993 513 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 ADAM2Q99965 735 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 MED4Q9NPJ6 270 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 RAB21Q9UL25 225 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 CNTN6Q9UQ52 1028 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
DDX39A-202ENST00000324340 EPN1Q9Y6I3 576 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-202ENST00000324340 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 EIF3CLB5ME19 914 aaKnown RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 EVI5O60447 810 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 SASH3O75995 380 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 GFPT2O94808 682 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 NDUFA10O95299 355 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ITGB3P05106 788 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ITGA4P13612 1032 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ATF7P17544 494 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 CYP3A5P20815 502 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 FAM189BP81408 668 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 TLE2Q04725 743 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 KLHL30Q0D2K2 578 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 CUL2Q13617 745 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ZNF598Q86UK7 904 aaKnown RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 UBR7Q8N806 425 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 FAM71BQ8TC56 605 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 EIF3CQ99613 913 aaKnown RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 SYT11Q9BT88 431 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-202ENST00000324340 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
DDX39A-202ENST00000324340 ANO9A1A5B4 782 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 C9IYK1 514 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 RBAK-RBAKDNI3L0D1 243 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PTGESO14684 152 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 INPPL1O15357 1258 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 XPOTO43592 962 aaKnown RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 URI1O94763 535 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 CXCL10P02778 98 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 ACO1P21399 889 aaKnown RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 EIF4A3P38919 411 aaKnown RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 LMAN1P49257 510 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 KIF11P52732 1056 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 RBP5P82980 135 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PTK2Q05397 1052 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 LONRF2Q1L5Z9 754 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 RTN4RL1Q86UN2 441 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 BEST2Q8NFU1 509 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 OLIG1Q8TAK6 271 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 LINC01599Q8WXQ3 324 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms