RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PPP2R2AP63151 447 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 KRT31Q15323 416 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 TSPAN17Q96FV3 270 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 USP32Q8NFA0 1604 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 PIK3CDO00329 1044 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 ADAM22Q9P0K1 906 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 CFLARO15519 480 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 TBC1D12O60347 775 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 R3HDM1Q15032 1099 aaKnown RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 OSBPL11Q9BXB4 747 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 HEG1Q9ULI3 1381 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 F8VZ95 297 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HAUS5O94927 633 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ADRA2BP18089 450 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ATF6P18850 670 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SOX5P35711 763 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 C21orf59P57076 290 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 C16orf89Q6UX73 402 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 PAGE5Q96GU1 130 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 DNAJC11Q9NVH1 559 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 CLDN3O15551 220 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 MCUQ8NE86 351 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 CAPSLQ8WWF8 208 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 CYGBQ8WWM9 190 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ABHD8Q96I13 439 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 FOPNLQ96NB1 174 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ETNK1Q9HBU6 452 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SLC16A3O15427 465 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ITGA1P56199 1179 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 EFTUD2Q15029 972 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 PDXDC2PQ6P474 469 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 LVRNQ6Q4G3 990 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RASSF6Q6ZTQ3 369 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 NLRP14Q86W24 1093 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ELOA2Q8IYF1 753 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RYBPQ8N488 228 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 MB21D1Q8N884 522 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 TMEM51Q9NW97 253 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ZBTB5O15062 677 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SNAPC5O75971 98 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 GYG1P46976 350 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 KCNB1Q14721 858 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ANKRD26P1Q6NSI1 321 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 MTHFD1LQ6UB35 978 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HSPH1Q92598 858 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RGS17Q9UGC6 210 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 VPS9D1Q9Y2B5 631 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RPH3AQ9Y2J0 694 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 CYP21A2P08686 494 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 STAT4Q14765 748 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 MAPK6Q16659 721 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF699Q32M78 642 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 TTC23LQ6PF05 361 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 MRPL48Q96GC5 212 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HEXIM2Q96MH2 286 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 WWP1Q9H0M0 922 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 XKR8Q9H6D3 395 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 USE1Q9NZ43 259 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 KLHL8Q9P2G9 620 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 PSME3P61289 254 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 EFL1Q7Z2Z2 1120 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 FRMD5Q7Z6J6 570 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RPS2P15880 293 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 USP11P51784 963 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 KRT33BQ14525 404 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 FICDQ9BVA6 458 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ATXN10Q9UBB4 475 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 PPARGC1AQ9UBK2 798 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ABCB11O95342 1321 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 USP17L3A6NCW0 530 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 USP17L4A6NCW7 530 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 USP17L1Q7RTZ2 530 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 PIK3C3Q8NEB9 887 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 TMEM165Q9HC07 324 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RPRD1BQ9NQG5 326 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SCAF8Q9UPN6 1271 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 hCG_1642624A0A1W2PR95 340 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SNAP23O00161 211 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 SCAMP1O15126 338 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HEATR6Q6AI08 1181 aaKnown RBP10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ZYG11AQ6WRX3 759 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 RHOT1Q8IXI2 618 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 C12orf4Q9NQ89 552 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 HOXC10Q9NYD6 342 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 WDR35Q9P2L0 1181 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 ITM2BQ9Y287 266 aa10.16□□□□□ -0.78
COL12A1-201ENST00000322507 BCL10O95999 233 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CLEC17AQ6ZS10 378 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CLIC6Q96NY7 704 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 BFARQ9NZS9 450 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 NR3C1P04150 777 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 RAP1GAPP47736 663 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 EIF2B5Q13144 721 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CENPPQ6IPU0 288 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ADAT2Q7Z6V5 191 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 GUF1Q8N442 669 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 MMADHCQ9H3L0 296 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms