RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 PPM1NQ8N819 430 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 CLEC4DQ8WXI8 215 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 ATP6V1G3Q96LB4 118 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 KLHL14Q9P2G3 628 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 IP6K2Q9UHH9 426 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 AJAP1Q9UKB5 411 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-201ENST00000321105 GTF3C4Q9UKN8 822 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
TOP3A-201ENST00000321105 STAG3L1P0CL83 205 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 GCLCP48506 637 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 TNFAIP2Q03169 654 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 FSTL1Q12841 308 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 FAM117BQ6P1L5 589 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 SLC13A5Q86YT5 568 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 TSEN2Q8NCE0 465 aaKnown RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 LRRC8CQ8TDW0 803 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 EPS8L1Q8TE68 723 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 CCDC97Q96F63 343 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 ZSWIM1Q9BR11 485 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 UVRAGQ9P2Y5 699 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 BNIP3LO60238 219 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 CPP00450 1065 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 YY1P25490 414 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 HGSNATQ68CP4 663 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 ZNF449Q6P9G9 518 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 TTC17Q96AE7 1141 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 RBM41Q96IZ5 413 aaKnown RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 RBM15Q96T37 977 aaKnown RBP eCLIP11.63□□□□□ -0.555e-11■■■■■ 35.8
TOP3A-201ENST00000321105 SENP7Q9BQF6 1050 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-201ENST00000321105 FANCGO15287 622 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 PHBP35232 272 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 LMNB2Q03252 620 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 XRRA1Q6P2D8 792 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 SLC13A1Q9BZW2 595 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 PORCNQ9H237 461 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 DCTN4Q9UJW0 460 aa11.63□□□□□ -0.55
TOP3A-201ENST00000321105 NUP98P52948 1817 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 RFC5P40937 340 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 E2F5Q15329 346 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 FYB2Q5VWT5 728 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 BTBD7Q9P203 1132 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 ITGA8P53708 1063 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 EEF1DP3Q658K8 133 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 CENPUQ71F23 418 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 CPNE8Q86YQ8 564 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 TMEM121Q9BTD3 319 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 CARD9Q9H257 536 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SEMA4AQ9H3S1 761 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 FIS1Q9Y3D6 152 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 NID2Q14112 1375 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 MYO1CO00159 1063 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 TBC1D12O60347 775 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 PHF2O75151 1096 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 MT-ND3P03897 115 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SRGAP2BP0DMP2 458 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 RBP3P10745 1247 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 ACAT1P24752 427 aaKnown RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 HIRAP54198 1017 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SESN2P58004 480 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 EIF3EP60228 445 aaKnown RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 RCN2Q14257 317 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 ZCWPW2Q504Y3 356 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 MAP4K3Q8IVH8 894 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 DAW1Q8N136 415 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 DNAJB3Q8WWF6 145 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 PWWP2AQ96N64 755 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 PIH1D1Q9NWS0 290 aaKnown RBP11.62□□□□□ -0.55
TOP3A-201ENST00000321105 SNTG2Q9NY99 539 aa11.62□□□□□ -0.55
TOP3A-201ENST00000321105 CETPP11597 493 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 ABCD1P33897 745 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 SESN3P58005 492 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 RBP5P82980 135 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 AP1B1Q10567 949 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 KIAA0319LQ8IZA0 1049 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 FAM71DQ8N9W8 422 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 FEZF2Q8TBJ5 459 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-201ENST00000321105 C17orf75Q9HAS0 396 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-201ENST00000321105 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 ADCY3O60266 1144 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 MAPK7Q13164 816 aa11.61□□□□□ -0.55
TOP3A-201ENST00000321105 CCDC14Q49A88 953 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms