RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 MAFAQ8NHW3 353 aaPredicted RBP18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 IGFLR1Q9H665 355 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 CHST7Q9NS84 486 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 SIX4Q9UIU6 781 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 C2orf71A6NGG8 1288 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 ERCC5P28715 1186 aaPredicted RBP18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 CLDN10P78369 228 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 TYRO3Q06418 890 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 MYO1EQ12965 1108 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 PRSS55Q6UWB4 352 aaPredicted RBP18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 LRRC52Q8N7C0 313 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 METTL14Q9HCE5 456 aaKnown RBP18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 RRAGDQ9NQL2 400 aaPredicted RBP18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 VWA8A3KMH1 1905 aa18.85■□□□□ 0.61
SWSAP1-201ENST00000312423 IKBKBO14920 756 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 PER2O15055 1255 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 SPTLC1O15269 473 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 FGFR3P22607 806 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 GCLMP48507 274 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 ZSCAN23Q3MJ62 389 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 KIAA0319Q5VV43 1072 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 TDRD10Q5VZ19 366 aaKnown RBP18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 SCARA3Q6AZY7 606 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 GLYCTKQ8IVS8 523 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 HPDLQ96IR7 371 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 PCDHB8Q9UN66 801 aa18.84■□□□□ 0.61
SWSAP1-201ENST00000312423 SYCE3A1L190 88 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 KPNA7A9QM74 516 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 SYN3O14994 580 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 STX10O60499 249 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 GNA14O95837 355 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 ODC1P11926 461 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 PAX3P23760 479 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 AARSP49588 968 aaKnown RBP eCLIP18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 ENPEPQ07075 957 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 PSMD5Q16401 504 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 CT47A1Q5JQC4 288 aaPredicted RBP18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 C1orf220Q5T0J3 134 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 PDXDC1Q6P996 788 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 EP400NLQ6ZTU2 488 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 C11orf57Q6ZUT1 292 aaPredicted RBP18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 APPL2Q8NEU8 664 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 BORCS6Q96GS4 357 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 SENP8Q96LD8 212 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 MED15Q96RN5 788 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 PPP1R9BQ96SB3 815 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 TIMM13Q9Y5L4 95 aaPredicted RBP18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 IRAK3Q9Y616 596 aa18.83■□□□□ 0.61
SWSAP1-201ENST00000312423 ARHGEF37A1IGU5 675 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CYB561D2O14569 222 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CCDC192P0DO97 292 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 RPL17P18621 184 aaKnown RBP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 PIK3CAP42336 1068 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CREMQ03060 361 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 PPP3CAQ08209 521 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 VARS2Q5ST30 1063 aaKnown RBP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 DNAJC25Q9H1X3 360 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 M0QZQ0 153 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CST3P01034 146 aaPredicted RBP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 C4BPAP04003 597 aaKnown RBP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 CNPP09543 421 aaKnown RBP18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 KLRC2P26717 231 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 HYAL1Q12794 435 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 NCOA4Q13772 614 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 ZACNQ401N2 412 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 ANKS3Q6ZW76 656 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 SNX9Q9Y5X1 595 aa18.82■□□□□ 0.6
SWSAP1-201ENST00000312423 LILRB3O75022 631 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 ADH1AP07327 375 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 MXI1P50539 228 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 MYL6P60660 151 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 YWHAHQ04917 246 aaPredicted RBP18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 DUSP6Q16828 381 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 METTL23Q86XA0 190 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 KLHL5Q96PQ7 755 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 CDCA3Q99618 268 aaPredicted RBP18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 TMEM8AQ9HCN3 771 aa18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 MAGEC2Q9UBF1 373 aaPredicted RBP18.81■□□□□ 0.6
SWSAP1-201ENST00000312423 H7C4K7 107 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 TEX28O15482 410 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 HUS1O60921 280 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 GTF2H1P32780 548 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 ZNF699Q32M78 642 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 ANO6Q4KMQ2 910 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 CTXN3Q4LDR2 81 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 HSP90AA4PQ58FG1 418 aa18.8■□□□□ 0.6
SWSAP1-201ENST00000312423 KRT39Q6A163 491 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms