RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 PCIF1Q9H4Z3 704 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 TMEM206Q9H813 350 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 HCFC1R1Q9NWW0 138 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 SERTAD1Q9UHV2 236 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 DERAQ9Y315 318 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 C2CD2Q9Y426 696 aa17.67■□□□□ 0.42
LSM1-201ENST00000311351 XYLBO75191 536 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 ABLIM3O94929 683 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 SEC24AO95486 1093 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 CPB1P15086 417 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 GARTP22102 1010 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 HOXD13P35453 343 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 KRT85P78386 507 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 YWHAHQ04917 246 aaPredicted RBP17.66■□□□□ 0.42
LSM1-201ENST00000311351 CUL4BQ13620 913 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 ARMCX5Q6P1M9 558 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 CNNM4Q6P4Q7 775 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 UNC13DQ70J99 1090 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
LSM1-201ENST00000311351 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 RSAD2Q8WXG1 361 aa17.66■□□□□ 0.42
LSM1-201ENST00000311351 RBAKQ9NYW8 714 aaPredicted RBP17.66■□□□□ 0.42
LSM1-201ENST00000311351 A0A1B0GVL5 298 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 ANO9A1A5B4 782 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 PIRO00625 290 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 PRRG1O14668 218 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 ACTN4O43707 911 aaKnown RBP17.65■□□□□ 0.42
LSM1-201ENST00000311351 IL18RAPO95256 599 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 PDGFBP01127 241 aaPredicted RBP17.65■□□□□ 0.42
LSM1-201ENST00000311351 OR4Q2P0C623 313 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 PFKFB1P16118 471 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 FSHRP23945 695 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 LILRA4P59901 499 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 EHHADHQ08426 723 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 STXBP4Q6ZWJ1 553 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 EPM2AIP1Q7L775 607 aaPredicted RBP17.65■□□□□ 0.42
LSM1-201ENST00000311351 PBXIP1Q96AQ6 731 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 SENP8Q96LD8 212 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 KCNK12Q9HB15 430 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 DPP3Q9NY33 737 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 EPS15L1Q9UBC2 864 aa17.65■□□□□ 0.42
LSM1-201ENST00000311351 EIF3DO15371 548 aaKnown RBP eCLIP17.64■□□□□ 0.41
LSM1-201ENST00000311351 EXTL3O43909 919 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 OAZ2O95190 189 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 POU2F2P09086 479 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 ODC1P11926 461 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 ATF2P15336 505 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 ELF1P32519 619 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.41
LSM1-201ENST00000311351 POU5F1Q01860 360 aaKnown RBP17.64■□□□□ 0.41
LSM1-201ENST00000311351 RNF19BQ6ZMZ0 732 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 USP37Q86T82 979 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 NELFCDQ8IXH7 590 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 UBALD2Q8IYN6 164 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 CEP57L1Q8IYX8 460 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 ITFG1Q8TB96 612 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 DNMT3BQ9UBC3 853 aaKnown RBP17.64■□□□□ 0.41
LSM1-201ENST00000311351 INSL5Q9Y5Q6 135 aa17.64■□□□□ 0.41
LSM1-201ENST00000311351 ARHGEF37A1IGU5 675 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 NARSO43776 548 aaKnown RBP17.63■□□□□ 0.41
LSM1-201ENST00000311351 LDHAP00338 332 aaKnown RBP17.63■□□□□ 0.41
LSM1-201ENST00000311351 LRG1P02750 347 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 LAMP2P13473 410 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 TYMPP19971 482 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 TAF6P49848 677 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 ADCY1Q08828 1119 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 PABPC1LQ4VXU2 614 aaKnown RBP17.63■□□□□ 0.41
LSM1-201ENST00000311351 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 LMBRD2Q68DH5 695 aaPredicted RBP17.63■□□□□ 0.41
LSM1-201ENST00000311351 SCARA3Q6AZY7 606 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 OVOS1Q6IE37 1185 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 BMP8AQ7Z5Y6 402 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 TCEAL8Q8IYN2 117 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 GPD1LQ8N335 351 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 SCFD1Q8WVM8 642 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 ING5Q8WYH8 240 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 PGLYRP2Q96PD5 576 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 TMEM209Q96SK2 561 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 PDE11AQ9HCR9 933 aa17.63■□□□□ 0.41
LSM1-201ENST00000311351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.63■□□□□ 0.41
LSM1-201ENST00000311351 AFF4Q9UHB7 1163 aaKnown RBP17.63■□□□□ 0.41
LSM1-201ENST00000311351 VNN2O95498 520 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 SLFN14P0C7P3 912 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 CMA1P23946 247 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
LSM1-201ENST00000311351 TDGQ13569 410 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 SLC5A9Q2M3M2 681 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 RTL10Q7L3V2 364 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 CBWD2Q8IUF1 395 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 FBXL6Q8N531 539 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 C1orf127Q8N9H9 656 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 ZNF507Q8TCN5 953 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 MFSD14AQ96MC6 490 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 PYM1Q9BRP8 204 aaKnown RBP17.62■□□□□ 0.41
LSM1-201ENST00000311351 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 SLC39A2Q9NP94 309 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 HSPBP1Q9NZL4 362 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms