RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 SMYD3Q9H7B4 428 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 ANXA13P27216 316 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 MLH1P40692 756 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 PAFAH1B1P43034 410 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 KLHDC9Q8NEP7 349 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 ADAM2Q99965 735 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 OSGEPQ9NPF4 335 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 JRKLQ9Y4A0 524 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CLDN10P78369 228 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF618Q5T7W0 954 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 SLC35G2Q8TBE7 412 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 FAM105AQ9NUU6 356 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
TRIM59-201ENST00000309784 SALL4Q9UJQ4 1053 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ITGA11Q9UKX5 1188 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ANKRD62A6NC57 917 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 SPOPO43791 374 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 RTN2O75298 545 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 CHRNA1P02708 482 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 GPC5P78333 572 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ENPEPQ07075 957 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 RPS6KA1Q15418 735 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 LIN9Q5TKA1 542 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 AGO3Q9H9G7 860 aaKnown RBP11.87□□□□□ -0.51
TRIM59-201ENST00000309784 FMO1Q01740 532 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 NAA30Q147X3 362 aaPredicted RBP11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ODF2Q5BJF6 829 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
TRIM59-201ENST00000309784 KCNN1Q92952 543 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 MGAMO43451 1857 aa11.87□□□□□ -0.51
TRIM59-201ENST00000309784 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 KCNK3O14649 394 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 LCA5LO95447 670 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 POMCP01189 267 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PAN2Q504Q3 1202 aaKnown RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 MAP3K21Q5TCX8 1036 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 RFFLQ8WZ73 363 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SNX27Q96L92 541 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PCDHB18PQ96TA0 734 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SIX4Q9UIU6 781 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 RPLP2P05387 115 aaKnown RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PDGFRBP09619 1106 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CFHR5Q9BXR6 569 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SNX25Q9H3E2 840 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PLEKHA5Q9HAU0 1116 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SAGE1Q9NXZ1 904 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 USTQ9Y2C2 406 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 MYH10P35580 1976 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 A8MXQ7 604 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CD4P01730 458 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 RNASELQ05823 741 aaKnown RBP11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PDE4CQ08493 712 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PTK7Q13308 1070 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 DCUN1D2Q6PH85 259 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF606Q8WXB4 792 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 ARHGEF26Q96DR7 871 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CACNG4Q9UBN1 327 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 CASTOR2A6NHX0 329 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 GOLGA8SH3BPF8 625 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 PPEF2O14830 753 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF185O15231 689 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 HUS1O60921 280 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 TMEM253P0C7T8 217 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SCNN1GP51170 649 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
TRIM59-201ENST00000309784 DNAH12Q6ZR08 3092 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 PJA2O43164 708 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 CCL5P13501 91 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 ATICP31939 592 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 ERCC6LQ2NKX8 1250 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 DSTYKQ6XUX3 929 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 MMS22LQ6ZRQ5 1243 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 RHOT2Q8IXI1 618 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 ABI1Q8IZP0 508 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
TRIM59-201ENST00000309784 C1orf131Q8NDD1 294 aaKnown RBP11.85□□□□□ -0.51
TRIM59-201ENST00000309784 NOCTQ9UK39 431 aaKnown RBP11.85□□□□□ -0.51
TRIM59-201ENST00000309784 M0QYV0 167 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms