RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CENPCQ03188 943 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 MAMLD1Q13495 774 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 LRRC14Q15048 493 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 MAPK6Q16659 721 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 KYNUQ16719 465 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 QPCTQ16769 361 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 MON1BQ7L1V2 547 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 TADA2BQ86TJ2 420 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.44
PTPN2-201ENST00000309660 DCPSQ96C86 337 aaKnown RBP12.27□□□□□ -0.44
PTPN2-201ENST00000309660 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.44
PTPN2-201ENST00000309660 CDC42EP4Q9H3Q1 356 aaKnown RBP12.27□□□□□ -0.44
PTPN2-201ENST00000309660 MRPL47Q9HD33 250 aaKnown RBP12.27□□□□□ -0.44
PTPN2-201ENST00000309660 B4GALT5O43286 388 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 RIPK2O43353 540 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 PROSCO94903 275 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 PSMC4P43686 418 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 FNTAP49354 379 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 GJC2Q5T442 439 aaPredicted RBP12.27□□□□□ -0.45
PTPN2-201ENST00000309660 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 EFCAB13Q8IY85 973 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 PPM1EQ8WY54 764 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 CABS1Q96KC9 395 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 FAM81BQ96LP2 452 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 SPATA33Q96N06 139 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
PTPN2-201ENST00000309660 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 FSCN2O14926 492 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 IFNB1P01574 187 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 RAP1GAPP47736 663 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 DRG2P55039 364 aaKnown RBP12.27□□□□□ -0.45
PTPN2-201ENST00000309660 DYNLT1P63172 113 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 SLMAPQ14BN4 828 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
PTPN2-201ENST00000309660 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.45
PTPN2-201ENST00000309660 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.45
PTPN2-201ENST00000309660 KRT1P04264 644 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 MYBL1P10243 752 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 TCEAL1Q15170 157 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 GPAT2Q6NUI2 795 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 DNAJC24Q6P3W2 148 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 METTL7BQ6UX53 244 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 ZNF677Q86XU0 584 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 ANKRD42Q8N9B4 389 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 DDX27Q96GQ7 796 aaKnown RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 TXLNGYQ9BZA5 131 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 LRRC19Q9H756 370 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 KCNK9Q9NPC2 374 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 ZNF148Q9UQR1 794 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 TOM1L1O75674 476 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 CYP1A1P04798 512 aaPredicted RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 MTM1Q13496 603 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 CISHQ9NSE2 258 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 INTS9Q9NV88 658 aaKnown RBP12.26□□□□□ -0.45
PTPN2-201ENST00000309660 GINS2Q9Y248 185 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 CNTNAP2Q9UHC6 1331 aa12.26□□□□□ -0.45
PTPN2-201ENST00000309660 A0A087WUV0 522 aaPredicted RBP12.25□□□□□ -0.45
PTPN2-201ENST00000309660 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 F8VP50 259 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 RARGP13631 454 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ICAM3P32942 547 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 RFC5P40937 340 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 SLC1A1P43005 524 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 LACTBP83111 547 aaPredicted RBP12.25□□□□□ -0.45
PTPN2-201ENST00000309660 KCTD2Q14681 263 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ZNF699Q32M78 642 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ART4Q93070 314 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 DCLK3Q9C098 648 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ATG7O95352 703 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 NUDT17P0C025 328 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 GBP1P32455 592 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ABCD1P33897 745 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 CETN2P41208 172 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 CDH8P55286 799 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 SMTNL2Q2TAL5 461 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 FBXW10Q5XX13 1052 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ANKS1BQ7Z6G8 1248 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 GPC2Q8N158 579 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms