RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 KPNA7A9QM74 516 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 TRAPPC3O43617 180 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 HLA-DRAP01903 254 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SOD2P04179 222 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 ATP1A3P13637 1013 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
APTX-201ENST00000309615 PNPLA4P41247 253 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 PIK3CAP42336 1068 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 ERVFC1P60507 584 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 UBE3AQ05086 875 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SV2CQ496J9 727 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 FAM200AQ8TCP9 573 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SUSD3Q96L08 255 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 COL4A4P53420 1690 aaPredicted RBP13.87□□□□□ -0.19
APTX-201ENST00000309615 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
APTX-201ENST00000309615 PRKCSHP14314 528 aaPredicted RBP13.87□□□□□ -0.19
APTX-201ENST00000309615 MYL7Q01449 175 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
APTX-201ENST00000309615 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 KRT31Q15323 416 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 MAN2A1Q16706 1144 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 MIIPQ5JXC2 388 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 CEP57Q86XR8 500 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 FBXL13Q8NEE6 735 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SENP8Q96LD8 212 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 ZBP1Q9H171 429 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 TLR9Q9NR96 1032 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
APTX-201ENST00000309615 SCN1AP35498 2009 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 M0QZQ0 153 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
APTX-201ENST00000309615 FGFR3P22607 806 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
APTX-201ENST00000309615 IRS1P35568 1242 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 TCF25Q9BQ70 676 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 TTPALQ9BTX7 342 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 HERC2P3Q9BVR0 1158 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 TAB2Q9NYJ8 693 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 COQ4Q9Y3A0 265 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 TIMM13Q9Y5L4 95 aaPredicted RBP13.86□□□□□ -0.19
APTX-201ENST00000309615 SNX9Q9Y5X1 595 aa13.86□□□□□ -0.19
APTX-201ENST00000309615 C2CD2LO14523 706 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 CYB561D2O14569 222 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 CLSTN1O94985 981 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 ASS1P00966 412 aaKnown RBP13.85□□□□□ -0.19
APTX-201ENST00000309615 CTSAP10619 480 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 ATICP31939 592 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 ADGRE1Q14246 886 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 ZNF699Q32M78 642 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 WDR72Q3MJ13 1102 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 SPOPLQ6IQ16 392 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
APTX-201ENST00000309615 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 RNF214Q8ND24 703 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 GDAP2Q9NXN4 497 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 NXF1Q9UBU9 619 aaKnown RBP13.85□□□□□ -0.19
APTX-201ENST00000309615 STK39Q9UEW8 545 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
APTX-201ENST00000309615 FSCN2O14926 492 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 PMM2O15305 246 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 N4BP1O75113 896 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 STAU1O95793 577 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 PAX3P23760 479 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 GLUD2P49448 558 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 DSG1Q02413 1049 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 KIAA0319Q5VV43 1072 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 PLPP4Q5VZY2 271 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 PRSS55Q6UWB4 352 aaPredicted RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 APTXQ7Z2E3 356 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 RIN2Q8WYP3 895 aaPredicted RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 MRPL38Q96DV4 380 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 VPS16Q9H269 839 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 VRTNQ9H8Y1 702 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 APOBEC3GQ9HC16 384 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 POLIQ9UNA4 740 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 HIDE1A8MVS5 230 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
APTX-201ENST00000309615 SYN3O14994 580 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 P4HA2O15460 535 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 CXCL14O95715 111 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 URODP06132 367 aa13.84□□□□□ -0.19
APTX-201ENST00000309615 ODC1P11926 461 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms