RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TRIML2Q8N7C3 387 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 USP38Q8NB14 1042 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 RNF217Q8TC41 542 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 XPO7Q9UIA9 1087 aaKnown RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 CHUKO15111 745 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 RAD51CO43502 376 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 WEE2P0C1S8 567 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 GTF2H1P32780 548 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 IFNA8P32881 189 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 ATXN7L3BQ96GX2 97 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 NDFIP2Q9NV92 336 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 EEF2KO00418 725 aaKnown RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 CYP2B6P20813 491 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 ATPAF2Q8N5M1 289 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 EML4Q9HC35 981 aaKnown RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 SMAPO00193 183 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 E2F6O75461 281 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 SREBF1P36956 1147 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 ANO4Q32M45 955 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 SPATA21Q7Z572 469 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 KRT35Q92764 455 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 AGAP3Q96P47 875 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 FAM49BQ9NUQ9 324 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 PSMC3IPQ9P2W1 217 aaPredicted RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 FER1L4A9Z1Z3 1794 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 DDTLA6NHG4 134 aaPredicted RBP16.73■□□□□ 0.27
USP42-201ENST00000306177 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
USP42-201ENST00000306177 MED24O75448 989 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 CENPCQ03188 943 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 NTRK3Q16288 839 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 GPD1P21695 349 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 PCSK1P29120 753 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 CAPRIN1Q14444 709 aaKnown RBP16.73■□□□□ 0.27
USP42-201ENST00000306177 FEZF2Q8TBJ5 459 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 C9orf72Q96LT7 481 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 PAK5Q9P286 719 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 MAPRE2Q15555 327 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 AGXT2Q9BYV1 514 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 SMARCAL1Q9NZC9 954 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 ADA2Q9NZK5 511 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 ZNF212Q9UDV6 495 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 SALL1Q9NSC2 1324 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 TCP11X1B4DZS4 312 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 SERPINB9P50453 376 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 AP2B1P63010 937 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 UGP2Q16851 508 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 LONRF1Q17RB8 773 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 GJB7Q6PEY0 223 aa16.73■□□□□ 0.27
USP42-201ENST00000306177 ZBTB41Q5SVQ8 909 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 RGS9BPQ6ZS82 235 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 MMGT1Q8N4V1 131 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 SAMD3Q8N6K7 520 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 GMCL1P1Q8NEA9 526 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 HPDLQ96IR7 371 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 KIFC3Q9BVG8 833 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 GOLGA8RI6L899 631 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 GRAP2O75791 330 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 SYCP2LQ5T4T6 812 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 EPN3Q9H201 632 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 GTF3C4Q9UKN8 822 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
USP42-201ENST00000306177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
USP42-201ENST00000306177 SPAG6O75602 509 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 LBRQ14739 615 aaKnown RBP16.72■□□□□ 0.27
USP42-201ENST00000306177 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
USP42-201ENST00000306177 KBTBD4Q9NVX7 518 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 CHN1P15882 459 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 AGBL2Q5U5Z8 902 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 DDIASQ8IXT1 998 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 DNAJC7Q99615 494 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 ERP44Q9BS26 406 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
USP42-201ENST00000306177 ARL2BPQ9Y2Y0 163 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
USP42-201ENST00000306177 KBTBD13C9JR72 458 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 CYBBP04839 570 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 GOLGA7BQ2TAP0 167 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 EFHC1Q5JVL4 640 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 ISCUQ9H1K1 167 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 PNPLA4P41247 253 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 ZNF200P98182 395 aaPredicted RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 CUL2Q13617 745 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 SNX17Q15036 470 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms