RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 MTERF2Q49AM1 385 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 ARMC3Q5W041 872 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 MOB2Q70IA6 237 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 SLC47A2Q86VL8 602 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 RIOX2Q8IUF8 465 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 PPM1KQ8N3J5 372 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 MGARPQ8TDB4 240 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 NUP85Q9BW27 656 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 ADGRA3Q8IWK6 1321 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 LOC285556D6RIA3 1793 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 A6NHS1 94 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 CYP26A1O43174 497 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 AHCYL1O43865 530 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 CYP1A2P05177 515 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 NEFHP12036 1026 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 SIX1Q15475 284 aaPredicted RBP17.17■□□□□ 0.34
LONRF3-201ENST00000304778 TRPM8Q7Z2W7 1104 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 CCDC105Q8IYK2 499 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 C12orf50Q8NA57 414 aaPredicted RBP17.17■□□□□ 0.34
LONRF3-201ENST00000304778 SHC3Q92529 594 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 ART4Q93070 314 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 GTF3C4Q9UKN8 822 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 PTPRFP10586 1907 aa17.17■□□□□ 0.34
LONRF3-201ENST00000304778 RIPK2O43353 540 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ALADP13716 330 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ATP4AP20648 1035 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 FGFR4P22455 802 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 CCND1P24385 295 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ICAM3P32942 547 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 SNRNP35Q16560 246 aaKnown RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 SLC39A4Q6P5W5 647 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 C17orf75Q9HAS0 396 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ZFATQ9P243 1243 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 OTOFQ9HC10 1997 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 LIN7AO14910 233 aaPredicted RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 VIMP08670 466 aaKnown RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 RARGP13631 454 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 MFAP3P55082 362 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 CPNE8Q86YQ8 564 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ZNF653Q96CK0 615 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 BTBD6Q96KE9 485 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 OSBPL1AQ9BXW6 950 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 TRIM33Q9UPN9 1127 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 CREB1P16220 341 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 PAPOLAP51003 745 aaKnown RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 MCCD1P59942 119 aaPredicted RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 XKR3Q5GH77 459 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 EPS8L3Q8TE67 593 aaKnown RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
LONRF3-201ENST00000304778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.344e-14■■■■■ 124.2
LONRF3-201ENST00000304778 ZNF302Q9NR11 478 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 UVRAGQ9P2Y5 699 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 FBXO40Q9UH90 709 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
LONRF3-201ENST00000304778 ARID2Q68CP9 1835 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 RARAP10276 462 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 ITIH4Q14624 930 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 ZC3H12AQ5D1E8 599 aaKnown RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 STMN4Q9H169 189 aaPredicted RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 PAPOLBQ9NRJ5 636 aaKnown RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 IGF2BP3O00425 579 aaKnown RBP eCLIP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 UBOX5O94941 541 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 ATG7O95352 703 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 GNAT1P11488 350 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 CYP11B1P15538 503 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 SLC5A9Q2M3M2 681 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 TNFAIP8L3Q5GJ75 292 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 PIGWQ7Z7B1 504 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 KCNV2Q8TDN2 545 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 SEMA4DQ92854 862 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 POP1Q99575 1024 aaKnown RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 TSC22D3Q99576 134 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 CCDC134Q9H6E4 229 aa17.15■□□□□ 0.34
LONRF3-201ENST00000304778 MAFBQ9Y5Q3 323 aaPredicted RBP17.15■□□□□ 0.34
LONRF3-201ENST00000304778 ASAP2O43150 1006 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 PDE6CP51160 858 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 NCALDP61601 193 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 CDR2Q01850 454 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 ADCY1Q08828 1119 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 CWF19L1Q69YN2 538 aaKnown RBP17.14■□□□□ 0.33
LONRF3-201ENST00000304778 POMGNT1Q8WZA1 660 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
LONRF3-201ENST00000304778 INTS9Q9NV88 658 aaKnown RBP17.14■□□□□ 0.33
LONRF3-201ENST00000304778 SAMD15Q9P1V8 674 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms