RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SAAL1Q96ER3 474 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 ASIC4Q96FT7 647 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 KCNK12Q9HB15 430 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 DPP3Q9NY33 737 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 MAFFQ9ULX9 164 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 ZFP37Q9Y6Q3 630 aaPredicted RBP28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 PPEF2O14830 753 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 ODC1P11926 461 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 TYMPP19971 482 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 FAM26FQ5R3K3 315 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 UNC13DQ70J99 1090 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 BRSK2Q8IWQ3 736 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 TCEAL8Q8IYN2 117 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 LEO1Q8WVC0 666 aaPredicted RBP28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 HPS3Q969F9 1004 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 MYADMQ96S97 322 aa28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 RBAKQ9NYW8 714 aaPredicted RBP28.62■■■□□ 2.17
CDKN2A-201ENST00000304494 EXTL3O43909 919 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 LRG1P02750 347 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 CPB1P15086 417 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 TDGQ13569 410 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 NXPE3Q969Y0 559 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 CBWD1Q9BRT8 395 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 CYP4F11Q9HBI6 524 aa28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 AFF4Q9UHB7 1163 aaKnown RBP28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 TIMM13Q9Y5L4 95 aaPredicted RBP28.61■■■□□ 2.17
CDKN2A-201ENST00000304494 TECTAO75443 2155 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 PVALEFA0A1B0GWK0 134 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 OR6C75A6NL08 312 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 SLFN14P0C7P3 912 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 CMA1P23946 247 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 EPM2AIP1Q7L775 607 aaPredicted RBP28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 SUGP1Q8IWZ8 645 aaKnown RBP28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 EFCAB13Q8IY85 973 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 GLIS3Q8NEA6 775 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 ZNF507Q8TCN5 953 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 SENP8Q96LD8 212 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 BLZF1Q9H2G9 400 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 PCIF1Q9H4Z3 704 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 UBE4BO95155 1302 aa28.6■■■□□ 2.17
CDKN2A-201ENST00000304494 LAMP2P13473 410 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 AFMP43652 599 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 TAF6P49848 677 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 OVOS1Q6IE37 1185 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 GPD1LQ8N335 351 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 NOC3LQ8WTT2 800 aaKnown RBP28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 CACTINQ8WUQ7 758 aaKnown RBP28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 USP25Q9UHP3 1055 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 DSEQ9UL01 958 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 ANK1P16157 1881 aa28.59■■■□□ 2.17
CDKN2A-201ENST00000304494 GOLGA8IPA6NC78 632 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 GOLGA8JA6NMD2 632 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 TULP1O00294 542 aaPredicted RBP28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 SPTLC1O15269 473 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 NTHL1P78549 312 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 EHHADHQ08426 723 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 ADCY1Q08828 1119 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 PABPC1LQ4VXU2 614 aaKnown RBP28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 FBXL6Q8N531 539 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 ZSWIM2Q8NEG5 633 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 SCAND2PQ9GZW5 306 aaPredicted RBP28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 DNMT3BQ9UBC3 853 aaKnown RBP28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 SERTAD1Q9UHV2 236 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 CDH7Q9ULB5 785 aa28.58■■■□□ 2.17
CDKN2A-201ENST00000304494 SEC24AO95486 1093 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 PFKFB1P16118 471 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 PNPLA4P41247 253 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 TFAMQ00059 246 aaKnown RBP28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 CUL4BQ13620 913 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 SV2CQ496J9 727 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 ZNF560Q96MR9 790 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 KCNH6Q9H252 994 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 SMOC2Q9H3U7 446 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 KIAA1586Q9HCI6 787 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 HCFC1R1Q9NWW0 138 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 DUSP12Q9UNI6 340 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 INSL5Q9Y5Q6 135 aa28.57■■■□□ 2.16
CDKN2A-201ENST00000304494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 CYP11A1P05108 521 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 CASP1P29466 404 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 SNRPFP62306 86 aaKnown RBP28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 MYBPC2Q14324 1141 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 RNF19BQ6ZMZ0 732 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 METTL23Q86XA0 190 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 ELMOD1Q8N336 334 aa28.56■■■□□ 2.16
CDKN2A-201ENST00000304494 A0A1B0GVL5 298 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 ZNF233A6NK53 670 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 ACTN4O43707 911 aaKnown RBP28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 PTPN2P17706 415 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 HOXD13P35453 343 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 FGF13Q92913 245 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 AVENQ9NQS1 362 aaPredicted RBP28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 HSPBP1Q9NZL4 362 aa28.55■■■□□ 2.16
CDKN2A-201ENST00000304494 ANHXE9PGG2 379 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 CYB561D2O14569 222 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 MYL1P05976 194 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 RHOP08100 348 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 WNT7BP56706 349 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 GPR17Q13304 367 aa28.54■■■□□ 2.16
CDKN2A-201ENST00000304494 SURF1Q15526 300 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms