RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IRAK1P51617 712 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 USP10Q14694 798 aaKnown RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 LZICQ8WZA0 190 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 MOV10L1Q9BXT6 1211 aaKnown RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 EHD2Q9NZN4 543 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 REXO1L1PQ8IX06 675 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ATPAF2Q8N5M1 289 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 PBXIP1Q96AQ6 731 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 STAMBPL1Q96FJ0 436 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ZNRF3Q9ULT6 936 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 SYNDIG1LA6NDD5 238 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 GPAT2Q6NUI2 795 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 BARGINQ6ZT62 677 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 MICALL2Q8IY33 904 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ELMO2Q96JJ3 720 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 FOXP3Q9BZS1 431 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 TLR2O60603 784 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 WEE2P0C1S8 567 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ENO3P13929 434 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-201ENST00000303531 PTPRN2Q92932 1015 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ERCC6L2Q5T890 1561 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 EEF2KO00418 725 aaKnown RBP14.61□□□□□ -0.07
PRKCB-201ENST00000303531 RARBP10826 455 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 RIT2Q99578 217 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 TASP1Q9H6P5 420 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 RUBCNLQ9H714 662 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 FAM49BQ9NUQ9 324 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 CHCHD3Q9NX63 227 aaKnown RBP14.61□□□□□ -0.07
PRKCB-201ENST00000303531 PAK5Q9P286 719 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ZNF70Q9UC06 446 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-201ENST00000303531 DPYSL4O14531 572 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 CST8O60676 142 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 GTF2H1P32780 548 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 HDAC4P56524 1084 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 DAB2P98082 770 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 SLC29A2Q14542 456 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 TRADDQ15628 312 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 E2F8A0AVK6 867 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 P4HA2O15460 535 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 CENPCQ03188 943 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 LVRNQ6Q4G3 990 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ZNF280CQ8ND82 737 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 ARHGEF38Q9NXL2 777 aa14.61□□□□□ -0.07
PRKCB-201ENST00000303531 EXTL3O43909 919 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 COILP38432 576 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 ERVK-24P63145 666 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 MFSD14CQ5VZR4 134 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SH3KBP1Q96B97 665 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 IGSF9BQ9UPX0 1349 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SLC37A4O43826 429 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 RFC5P40937 340 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 INPP5AQ14642 412 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 KIF2BQ8N4N8 673 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 RAD51Q06609 339 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 PTPAQ15257 358 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 UGP2Q16851 508 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 THEMIS2Q5TEJ8 643 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 TPCN2Q8NHX9 752 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SH3TC2Q8TF17 1288 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 PSMD3O43242 534 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 LINC00116Q8NCU8 138 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SUFUQ9UMX1 484 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 FARP1Q9Y4F1 1045 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SNRPFP62306 86 aaKnown RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 PTK2BQ14289 1009 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 PDIA6Q15084 440 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 ATF7IP2Q5U623 682 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 NT5C1AQ9BXI3 368 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 THAP2Q9H0W7 228 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 KCNH7Q9NS40 1196 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 MAP3K20Q9NYL2 800 aaKnown RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 OR9Q1Q8NGQ5 310 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 DLC1Q96QB1 1528 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 IL18RAPO95256 599 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 TTC30AQ86WT1 665 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 ZNF677Q86XU0 584 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 THTPAQ9BU02 230 aa14.6□□□□□ -0.07
PRKCB-201ENST00000303531 MRPL1Q9BYD6 325 aaKnown RBP14.6□□□□□ -0.07
PRKCB-201ENST00000303531 NEXMIFQ5QGS0 1516 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PTPRUQ92729 1446 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 HMOX2P30519 316 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 HSD17B3P37058 310 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 NUP93Q8N1F7 819 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 FEZF2Q8TBJ5 459 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 GJD4Q96KN9 370 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 PNKPQ96T60 521 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 INO80Q9ULG1 1556 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 SPAG6O75602 509 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 SNRPAP09012 282 aaKnown RBP14.59□□□□□ -0.07
PRKCB-201ENST00000303531 MYL2P10916 166 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 TROAPQ12815 778 aa14.59□□□□□ -0.07
PRKCB-201ENST00000303531 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms