RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 AP1G2O75843 785 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ANKRD20A4Q4UJ75 823 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ANKRD20A8PQ5CZ79 823 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ANKRD20A2Q5SQ80 823 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ANKRD20A1Q5TYW2 823 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 TBC1D1Q86TI0 1168 aaPredicted RBP13.72□□□□□ -0.21
ABR-202ENST00000302538 PDE11AQ9HCR9 933 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 RRAGDQ9NQL2 400 aaPredicted RBP13.72□□□□□ -0.21
ABR-202ENST00000302538 APEX2Q9UBZ4 518 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 CYB561D2O14569 222 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 RTN2O75298 545 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ACO1P21399 889 aaKnown RBP13.72□□□□□ -0.21
ABR-202ENST00000302538 LIG3P49916 1009 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 MORC4Q8TE76 937 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 ATXN7L3BQ96GX2 97 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
ABR-202ENST00000302538 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
ABR-202ENST00000302538 HNRNPCL2B2RXH8 293 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 PSMD3O43242 534 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 HNRNPCL1O60812 293 aaKnown RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 RPA1P27694 616 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 POLD3Q15054 466 aaPredicted RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 RGMBQ6NW40 437 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 RPRD1AQ96P16 312 aaPredicted RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 MED4Q9NPJ6 270 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 MSH4O15457 936 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 TLR2O60603 784 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 OCM2P0CE71 109 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 GHRP10912 638 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 SLC2A3P11169 496 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 FMO5P49326 533 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 PDIA2Q13087 525 aaKnown RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 PTGISQ16647 500 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 ITIH5Q86UX2 942 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CCDC197Q8NCU1 140 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 MCEEQ96PE7 176 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 L3MBTL1Q9Y468 752 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CCDC78A2IDD5 438 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CYP11B2P19099 503 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 GTF2A1P52655 376 aaPredicted RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
ABR-202ENST00000302538 POTEAQ6S8J7 498 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 ACAD11Q709F0 780 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 SLC25A41Q8N5S1 370 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 TEX12Q9BXU0 123 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
ABR-202ENST00000302538 OPHN1O60890 802 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 CKBP12277 381 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 SLC26A2P50443 739 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 CAV1Q03135 178 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.22
ABR-202ENST00000302538 CD302Q8IX05 232 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 DDI1Q8WTU0 396 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 PXMP2Q9NR77 195 aa13.71□□□□□ -0.22
ABR-202ENST00000302538 NOVA2Q9UNW9 492 aaKnown RBP13.71□□□□□ -0.22
ABR-202ENST00000302538 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 F5H5T6 163 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 GFAPP14136 432 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 SPDYE7PQ495Y7 208 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 METTL7BQ6UX53 244 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 ATP11CQ8NB49 1132 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 MAP3K14Q99558 947 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 SPATA16Q9BXB7 569 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 EHD4Q9H223 541 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 AP3B1O00203 1094 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 ATP6V1E1P36543 226 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 MRPS25P82663 173 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 MFSD10Q14728 455 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 E2F5Q15329 346 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 C6orf118Q5T5N4 469 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 DNAJB3Q8WWF6 145 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 TYK2P29597 1187 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 STARD3Q14849 445 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
ABR-202ENST00000302538 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
ABR-202ENST00000302538 SHC4Q6S5L8 630 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms