RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 SLC35C1Q96A29 364 aa8.13□□□□□ -1.11
LRRC28-201ENST00000301981 SGF29Q96ES7 293 aa8.13□□□□□ -1.11
LRRC28-201ENST00000301981 ZBTB45Q96K62 511 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-201ENST00000301981 IL1RL2Q9HB29 575 aa8.13□□□□□ -1.11
LRRC28-201ENST00000301981 PTPRHQ9HD43 1115 aa8.13□□□□□ -1.11
LRRC28-201ENST00000301981 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-201ENST00000301981 IQANK1A0A1B0GTG1 560 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 FAM237AA0A1B0GTK4 181 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ENTPD5O75356 428 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CYP11B1P15538 503 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 HSPA6P17066 643 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PTK7Q13308 1070 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CES3Q6UWW8 571 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 FBXL16Q8N461 479 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 DNAJC9Q8WXX5 260 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CCT6BQ92526 530 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ADA2Q9NZK5 511 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 AP1G2O75843 785 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 AVPR1AP37288 418 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 EPHA7Q15375 998 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CHI3L2Q15782 390 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 RASSF3Q86WH2 238 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 RNF149Q8NC42 400 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 SPDYE1Q8NFV5 336 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 MTA3Q9BTC8 594 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 GPR75-ASB3A0A0A6YYF3 556 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 NVLO15381 856 aaKnown RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PEX10O60683 326 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PPP1R11O60927 126 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ZMPSTE24O75844 475 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 NOL4O94818 638 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PSAPP07602 524 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ARPP19P56211 112 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PPP3CAQ08209 521 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 TFDP1Q14186 410 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ARMC3Q5W041 872 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PCNX4Q63HM2 1172 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 UTS2BQ765I0 119 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 SPATA20Q8TB22 786 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 TMA16Q96EY4 203 aaKnown RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 GTSE1Q9NYZ3 720 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ZNF711Q9Y462 761 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 RASSF10A6NK89 507 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CASQ2O14958 399 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 EEF1B2P24534 225 aaKnown RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 RPA3P35244 121 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 NME5P56597 212 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 PRAMEP78395 509 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 LMNB2Q03252 620 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ART3Q13508 389 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ACTRT1Q8TDG2 376 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 RPAP3Q9H6T3 665 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 ATP6V0A4Q9HBG4 840 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 KRT16P08779 473 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 NPY5RQ15761 445 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 DBN1Q16643 649 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 EDRF1Q3B7T1 1238 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 CDAN1Q8IWY9 1227 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.12□□□□□ -1.11
LRRC28-201ENST00000301981 SEMA4DQ92854 862 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 DNAJC19Q96DA6 116 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 APOL2Q9BQE5 337 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
LRRC28-201ENST00000301981 NOL3O60936 208 aaKnown RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 GPC4O75487 556 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 F7P08709 466 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 PLIN5Q00G26 463 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 JADE1Q6IE81 842 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 NLRP9Q7RTR0 991 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 FBXO36Q8NEA4 188 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 GLIS2Q9BZE0 524 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 GOLGA8QA0A0J9YX86 632 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 GOLGA8OA6NCC3 632 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 GOLGA8NF8WBI6 632 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 ENO3P13929 434 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 RFC5P40937 340 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 SLC12A3P55017 1021 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 IRX1P78414 480 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 ROR1Q01973 937 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 CCDC125Q86Z20 511 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 TRPV6Q9H1D0 765 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 NWD1Q149M9 1564 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 SLITRK3O94933 977 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 MYL2P10916 166 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 PYGBP11216 843 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 KRT3P12035 628 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 NMD3Q96D46 503 aaKnown RBP8.11□□□□□ -1.11
LRRC28-201ENST00000301981 MTMR9Q96QG7 549 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 SIK2Q9H0K1 926 aa8.11□□□□□ -1.11
LRRC28-201ENST00000301981 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms