RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 REXO1Q8N1G1 1221 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 USTQ9Y2C2 406 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 PVALEFA0A1B0GWK0 134 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CAPN8A6NHC0 703 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 CTC1Q2NKJ3 1217 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 KLHL35Q6PF15 583 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 TSHZ1Q6ZSZ6 1077 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 TRMT10CQ7L0Y3 403 aaKnown RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 ZNF554Q86TJ5 538 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CPNE9Q8IYJ1 553 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CCDC24Q8N4L8 307 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 ZBTB8BQ8NAP8 495 aaPredicted RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 GLIS1Q8NBF1 620 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 MTBPQ96DY7 904 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 ZSWIM1Q9BR11 485 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CCDC77Q9BR77 488 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 BARX2Q9UMQ3 279 aaPredicted RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 PLA2G4BP0C869 781 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 COL6A2P12110 1019 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 GJA8P48165 433 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 PPATQ06203 517 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 KIF22Q14807 665 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 C16orf72Q14CZ0 275 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 ANKDD1AQ495B1 522 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 RABGAP1LQ5R372 815 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 GRAMD1AQ96CP6 724 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 AK8Q96MA6 479 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 RILPQ96NA2 401 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 PRPF18Q99633 342 aaKnown RBP15.23■□□□□ 0.03
CDT1-201ENST00000301019 DCUN1D5Q9BTE7 237 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 NUP85Q9BW27 656 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 BARHL2Q9NY43 387 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 UMODL1Q5DID0 1318 aa15.23■□□□□ 0.03
CDT1-201ENST00000301019 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
CDT1-201ENST00000301019 CIB2O75838 187 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ZMPSTE24O75844 475 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ZBED8Q8IZ13 594 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 CORO1BQ9BR76 489 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 MIS12Q9H081 205 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ANGPTL2Q9UKU9 493 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 SH3GLB1Q9Y371 365 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 FCHO1O14526 889 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 PDGFRBP09619 1106 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 BGNP21810 368 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 RPL13P26373 211 aaKnown RBP15.22■□□□□ 0.03
CDT1-201ENST00000301019 CD300CQ08708 224 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 CCDC15Q0P6D6 951 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 SH2D4BQ5SQS7 431 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 IZUMO3Q5VZ72 239 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
CDT1-201ENST00000301019 OR6Y1Q8NGX8 325 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 HAPLN3Q96S86 360 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 MECRQ9BV79 373 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 SYNGAP1Q96PV0 1343 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 LOC100653049A0A140TA62 436 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 H3BSA7 217 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ECE2O60344 883 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 KRT34O76011 436 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 PRDX5P30044 214 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 CBWD6Q4V339 395 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 CBWD3Q5JTY5 395 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 CBWD5Q5RIA9 395 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 DPY19L2Q6NUT2 758 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 NLRP10Q86W26 655 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 TMPRSS6Q8IU80 811 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 GALNT4Q8N4A0 578 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 TCP10LQ8TDR4 215 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ZNF653Q96CK0 615 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 ACSF2Q96CM8 615 aaPredicted RBP15.22■□□□□ 0.03
CDT1-201ENST00000301019 ABHD8Q96I13 439 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 IVNS1ABPQ9Y6Y0 642 aa15.22■□□□□ 0.03
CDT1-201ENST00000301019 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 PIK3R2O00459 728 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 ARL4CP56559 192 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 PDK1Q15118 436 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 PDK3Q15120 406 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 OLFM3Q96PB7 478 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.03
CDT1-201ENST00000301019 MRPL1Q9BYD6 325 aaKnown RBP15.21■□□□□ 0.03
CDT1-201ENST00000301019 METTL14Q9HCE5 456 aaKnown RBP15.21■□□□□ 0.03
CDT1-201ENST00000301019 C6orf50Q9HD87 102 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 GPCPD1Q9NPB8 672 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 SLC7A8Q9UHI5 535 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms