RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 POLR3CQ9BUI4 534 aaPredicted RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 UVRAGQ9P2Y5 699 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 MARCOQ9UEW3 520 aaPredicted RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 LGALS13Q9UHV8 139 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 RREB1Q92766 1687 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SORBS3O60504 671 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 CYP1A2P05177 515 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 NR1H3Q13133 447 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SYDE2Q5VT97 1194 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 RINLQ6ZS11 566 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 HIPK4Q8NE63 616 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 NT5C1BQ96P26 610 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 ANKFY1Q9P2R3 1169 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 DNPEPQ9ULA0 475 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 OPHN1O60890 802 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 PSMG1O95456 288 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 AMPD1P23109 780 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 CAV1Q03135 178 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 GAD2Q05329 585 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 C12orf50Q8NA57 414 aaPredicted RBP15.5■□□□□ 0.07
COL6A2-201ENST00000300527 TCP10LQ8TDR4 215 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 NACC1Q96RE7 527 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 HSD17B14Q9BPX1 270 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 TRIM55Q9BYV6 548 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 DMAC2Q9NW81 257 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 ATP8B3O60423 1300 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 CCDC195A0A1B0GUA6 201 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 H3BRJ5 948 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 ADRB2P07550 413 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 ARP10275 920 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 SREBF1P36956 1147 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 NSFP46459 744 aaKnown RBP15.5■□□□□ 0.07
COL6A2-201ENST00000300527 GABPAQ06546 454 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 USP4Q13107 963 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 Q4G0T1 1027 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 FOXB2Q5VYV0 432 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 ACAD10Q6JQN1 1059 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 OTOP1Q7RTM1 612 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 MORC4Q8TE76 937 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 EPAS1Q99814 870 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 BTBD10Q9BSF8 475 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
COL6A2-201ENST00000300527 E7ENQ6 273 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 LMNAP02545 664 aaKnown RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 GZMAP12544 262 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 MAN1A1P33908 653 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 HADHBP55084 474 aaKnown RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 SLC34A1Q06495 639 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 TFDP1Q14186 410 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 BBS9Q3SYG4 887 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 FAM71AQ8IYT1 594 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 MAIP1Q8WWC4 291 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 FIZ1Q96SL8 496 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 GINM1Q9NU53 330 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 LARSQ9P2J5 1176 aaKnown RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 TXNDC9O14530 226 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 TBX3O15119 743 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 GSC2O15499 205 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 CYP3A4P08684 503 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 PRELPP51888 382 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 LBRQ14739 615 aaKnown RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 IZUMO2Q6UXV1 221 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 ANKS1BQ7Z6G8 1248 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 NSL1Q96IY1 281 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 TMEM120AQ9BXJ8 343 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 UNC45AQ9H3U1 944 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 PCMTD2Q9NV79 361 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 SAE1Q9UBE0 346 aaPredicted RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 SPATA31A1Q5TZJ5 1347 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 B2RBV5 119 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 RNF8O76064 485 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 ENDOVQ8N8Q3 282 aaKnown RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 EZH1Q92800 747 aaPredicted RBP15.49■□□□□ 0.07
COL6A2-201ENST00000300527 ANKRD27Q96NW4 1050 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 GORASP1Q9BQQ3 440 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 TSSK1BQ9BXA7 367 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 POLLQ9UGP5 575 aa15.49■□□□□ 0.07
COL6A2-201ENST00000300527 MYH14Q7Z406 1995 aaKnown RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 IGKV6D-41A0A0C4DH26 115 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 GSTT1P30711 240 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 GCLCP48506 637 aaPredicted RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 LRRC23Q53EV4 343 aaPredicted RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 OR52E8Q6IFG1 317 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 KBTBD2Q8IY47 623 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 POMGNT1Q8WZA1 660 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 PTPRN2Q92932 1015 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 TMEM121Q9BTD3 319 aa15.48■□□□□ 0.07
COL6A2-201ENST00000300527 PPARGC1AQ9UBK2 798 aaKnown RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 SMG5Q9UPR3 1016 aaKnown RBP15.48■□□□□ 0.07
COL6A2-201ENST00000300527 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms