RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 ENPP3O14638 875 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 PTGESO14684 152 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 GPR182O15218 404 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 OGTO15294 1046 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 CALUO43852 315 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 EXOC3O60645 756 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 MCF2P10911 925 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 MYOGP15173 224 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 ZNF165P49910 485 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 MYL5Q02045 173 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 POU5F1BQ06416 359 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 CYP24A1Q07973 514 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 PPIGQ13427 754 aaKnown RBP eCLIP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 STIM1Q13586 685 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 DOC2BQ14184 412 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 SHHQ15465 462 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 DCAF4L1Q3SXM0 396 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 CCDC40Q4G0X9 1142 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 DCAF17Q5H9S7 520 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 EFHC2Q5JST6 749 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 JADE1Q6IE81 842 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 BRSK2Q8IWQ3 736 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM186BQ8IYM0 893 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 GPD1LQ8N335 351 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 TMEM199Q8N511 208 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM200AQ8TCP9 573 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 PRIMPOLQ96LW4 560 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 TRIM6Q9C030 488 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 TMEM206Q9H813 350 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 DMAC2Q9NW81 257 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 RBAKQ9NYW8 714 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 CPSF3Q9UKF6 684 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 TRAF3IP3Q9Y228 551 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 STYXL1Q9Y6J8 313 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 BRCA2P51587 3418 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 KIAA1671Q9BY89 1806 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 BICDL2A1A5D9 508 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 CASTOR2A6NHX0 329 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 TBKBP1A7MCY6 615 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 KCNJ18B7U540 433 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 C2CD2LO14523 706 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 CLDN3O15551 220 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 EXTL3O43909 919 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 POMCP01189 267 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 DLATP10515 647 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 EPXP11678 715 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 ITGA4P13612 1032 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 GARTP22102 1010 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 RFC2P35250 354 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 PLA2G5P39877 138 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 GATA4P43694 442 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 GCLMP48507 274 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 DGKGP49619 791 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 KLK7P49862 253 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 CDR1P51861 262 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 BCAR1P56945 870 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 PPP3CAQ08209 521 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 ADAM9Q13443 819 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 KCNJ12Q14500 433 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 KRT31Q15323 416 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 SNRNP35Q16560 246 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 TPD52L1Q16890 204 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 EDRF1Q3B7T1 1238 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 SLC10A6Q3KNW5 377 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 TCERG1LQ5VWI1 586 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 SPATA1Q5VX52 437 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 XXYLT1Q8NBI6 393 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 HASPINQ8TF76 798 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 BCL7CQ8WUZ0 217 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 KCNN1Q92952 543 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 RNPC3Q96LT9 517 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 LBHD1Q9BQE6 289 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 PAAF1Q9BRP4 392 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 ADPGKQ9BRR6 497 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 MTMR12Q9C0I1 747 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 RSAD1Q9HA92 442 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 RGS18Q9NS28 235 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 INTS13Q9NVM9 706 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 PCDHB9Q9Y5E1 797 aa7.04□□□□□ -1.28
DEPDC4-201ENST00000299185 PDCD11Q14690 1871 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 I3L4J1 428 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 CETN3O15182 167 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 LETM1O95202 739 aaPredicted RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 FGBP02675 491 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 CLTAP09496 248 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 ARAFP10398 606 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 EPB41P11171 864 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 ZNF18P17022 549 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 AXLP30530 894 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 MTIF2P46199 727 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 SCTRP47872 440 aa7.03□□□□□ -1.28
DEPDC4-201ENST00000299185 KCNJ6P48051 423 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms