RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 C9orf72Q96LT7 481 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TBC1D10AQ9BXI6 508 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 SPATS2LQ9NUQ6 558 aaKnown RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TBK1Q9UHD2 729 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TBX20Q9UMR3 447 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 SHOC2Q9UQ13 582 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TSHRP16473 764 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 CYP24A1Q07973 514 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 TSNAXIP1Q2TAA8 658 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 LRRC38Q5VT99 294 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 PHF13Q86YI8 300 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 CBWD2Q8IUF1 395 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 RCOR2Q8IZ40 523 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 KIRREL3Q8IZU9 778 aa20.3■□□□□ 0.84
TRA2A-201ENST00000297071 ZNF483Q8TF39 744 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 RBM41Q96IZ5 413 aaKnown RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 NTPCRQ9BSD7 190 aaKnown RBP20.3■□□□□ 0.84
TRA2A-201ENST00000297071 COL11A2P13942 1736 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 NPTXRO95502 500 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 NPR1P16066 1061 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 GARTP22102 1010 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 CCNHP51946 323 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 CLDN10P78369 228 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 TRIP13Q15645 432 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 EFHC2Q5JST6 749 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 PLEKHA7Q6IQ23 1121 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 TAS1R2Q8TE23 839 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 ALKBH8Q96BT7 664 aaKnown RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 KIAA1683Q9H0B3 1180 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 ACP6Q9NPH0 428 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 TBC1D22BQ9NU19 505 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 NKX1-2Q9UD57 310 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-201ENST00000297071 UBIAD1Q9Y5Z9 338 aa20.29■□□□□ 0.84
TRA2A-201ENST00000297071 SIP14410 1827 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 LIASO43766 372 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 AHCYL1O43865 530 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 FESP07332 822 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 NSFP46459 744 aaKnown RBP20.28■□□□□ 0.84
TRA2A-201ENST00000297071 RAD23BP54727 409 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 DNAJC3Q13217 504 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 DOK7Q18PE1 504 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 FYB2Q5VWT5 728 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 CCDC174Q6PII3 467 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 FAM47EQ6ZV65 393 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 LONP2Q86WA8 852 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 TMEM161BQ8NDZ6 487 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 ZSWIM2Q8NEG5 633 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 KCNN1Q92952 543 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 OSBPL1AQ9BXW6 950 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 SAYSD1Q9NPB0 183 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
TRA2A-201ENST00000297071 PSMC3IPQ9P2W1 217 aaPredicted RBP20.28■□□□□ 0.84
TRA2A-201ENST00000297071 HAO1Q9UJM8 370 aa20.28■□□□□ 0.84
TRA2A-201ENST00000297071 TRPC5Q9UL62 973 aaPredicted RBP20.28■□□□□ 0.84
TRA2A-201ENST00000297071 G3V3G9 751 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 IL1BP01584 269 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 ITGB5P18084 799 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 MARK3P27448 753 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 CNGA1P29973 690 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 JAG1P78504 1218 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 P3H1Q32P28 736 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 DACT2Q5SW24 774 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 SV2AQ7L0J3 742 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 PCGF5Q86SE9 256 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 ALLCQ8N6M5 410 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 RBBP8NLQ8NC74 664 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 NUDCD1Q96RS6 583 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 AGO4Q9HCK5 861 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 C1orf112Q9NSG2 853 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 DNAJC17Q9NVM6 304 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 FOXO6A8MYZ6 492 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 SLC16A4O15374 487 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 ECM2O94769 699 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 LINGO3P0C6S8 592 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 TARSP26639 723 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 PEX3P56589 373 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 HHATQ5VTY9 493 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 PCNX4Q63HM2 1172 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 FAM91A1Q658Y4 838 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 ANO7Q6IWH7 933 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 SH3GL3Q99963 347 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 FRMD8P1Q9BZ68 369 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-201ENST00000297071 KCNH7Q9NS40 1196 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 STOML1Q9UBI4 398 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 FEM1BQ9UK73 627 aa20.27■□□□□ 0.84
TRA2A-201ENST00000297071 SMAPO00193 183 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 TM9SF1O15321 606 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 DNAJC6O75061 913 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms