RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GRM5P41594 1212 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 BRCC3P46736 316 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 MLLT6P55198 1093 aaPredicted RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 XKR4Q5GH76 650 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 LAIR1Q6GTX8 287 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 IQCEQ6IPM2 695 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CD300LGQ6UXG3 332 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ASB16Q96NS5 453 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CCDC94Q9BW85 323 aaPredicted RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 NAT10Q9H0A0 1025 aaKnown RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ZNF334Q9HCZ1 680 aaPredicted RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 CCDC39Q9UFE4 941 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 NDRG2Q9UN36 371 aaKnown RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 PCDHA7Q9UN72 937 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 DOCK6Q96HP0 2047 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 NOTCH4Q99466 2003 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FAM237AA0A1B0GTK4 181 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 WNT7AO00755 349 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FOXD2O60548 495 aaPredicted RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 CUTAO60888 179 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 TDGF1P13385 188 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FCARP24071 287 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 RPL9P32969 192 aaKnown RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 GUCY1B3Q02153 619 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FAM78AQ5JUQ0 283 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 NT5DC1Q5TFE4 455 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ALKAL1Q6UXT8 129 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 MAP4K3Q8IVH8 894 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ZNF687Q8N1G0 1237 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 NETO1Q8TDF5 533 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 FAM3CQ92520 227 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 SMARCD2Q92925 531 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 E2F7Q96AV8 911 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 ZNF512Q96ME7 567 aaPredicted RBP11.54□□□□□ -0.56
RFC4-201ENST00000296273 GPR88Q9GZN0 384 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 GOLGA2P5Q9HBQ8 144 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 USP20Q9Y2K6 914 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 NUB1Q9Y5A7 615 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 INSL5Q9Y5Q6 135 aa11.54□□□□□ -0.56
RFC4-201ENST00000296273 I3L4J1 428 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 PODXLO00592 558 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 RETP07949 1114 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 ADRB1P08588 477 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 OR52Z1P0C646 297 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 IGFBP6P24592 240 aaPredicted RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 GDI1P31150 447 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 CNR2P34972 360 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 TYRO3Q06418 890 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 MRPL58Q14197 206 aaKnown RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 GRM2Q14416 872 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 ZRSR1Q15695 479 aaKnown RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 ZNF280DQ6N043 979 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 POTEHQ6S545 545 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 VITQ6UXI7 678 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 KIFC3Q9BVG8 833 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 OXCT2Q9BYC2 517 aaPredicted RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 LMAN1LQ9HAT1 526 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 TRPV4Q9HBA0 871 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 ANO10Q9NW15 660 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 AFF4Q9UHB7 1163 aaKnown RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 USP25Q9UHP3 1055 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 NOL7Q9UMY1 257 aaKnown RBP11.53□□□□□ -0.56
RFC4-201ENST00000296273 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 PIAS3Q9Y6X2 628 aa11.53□□□□□ -0.56
RFC4-201ENST00000296273 DCDC2BA2VCK2 349 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ZNF263O14978 683 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 DTNBO60941 627 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 KCNE1P15382 129 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 CXCL12P48061 93 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 EPHA5P54756 1037 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ARPP19P56211 112 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 SOX4Q06945 474 aaPredicted RBP11.52□□□□□ -0.57
RFC4-201ENST00000296273 SPEM2Q0P670 501 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 LRRC32Q14392 662 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 STX1AQ16623 288 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 CTXN3Q4LDR2 81 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 MFSD6LQ8IWD5 586 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 CEP120Q8N960 986 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 APPL2Q8NEU8 664 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ACAP3Q96P50 834 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ACO2Q99798 780 aaKnown RBP11.52□□□□□ -0.57
RFC4-201ENST00000296273 PYM1Q9BRP8 204 aaKnown RBP11.52□□□□□ -0.57
RFC4-201ENST00000296273 MRPL4Q9BYD3 311 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms