RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SPTBN4Q9H254 2564 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 OAZ2O95190 189 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 NFICP08651 508 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 OR4Q2P0C623 313 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 SPATA1Q5VX52 437 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 JADE1Q6IE81 842 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 SFR1Q86XK3 245 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 PLA2G2FQ9BZM2 168 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 GDE1Q9NZC3 331 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 CEP72Q9P209 647 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 MTMR6Q9Y217 621 aa27.42■■□□□ 1.98
U2AF1-201ENST00000291552 F5P12259 2224 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 PPP1R37O75864 691 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 DCNP07585 359 aaKnown RBP27.41■■□□□ 1.98
U2AF1-201ENST00000291552 CPB1P15086 417 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 RFX1P22670 979 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 FCARP24071 287 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 STARD6P59095 220 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 DYMQ7RTS9 669 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 HS6ST3Q8IZP7 471 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 STK17AQ9UEE5 414 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 STYXL1Q9Y6J8 313 aa27.41■■□□□ 1.98
U2AF1-201ENST00000291552 PRR23AA6NEV1 266 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 MYMKA6NI61 221 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 SPTLC1O15269 473 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 LRRN2O75325 713 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 MOSPD3O75425 235 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 GLULP15104 373 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 ACOT2P49753 483 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 CEBPZQ03701 1054 aaKnown RBP27.4■■□□□ 1.98
U2AF1-201ENST00000291552 YWHAHQ04917 246 aaPredicted RBP27.4■■□□□ 1.98
U2AF1-201ENST00000291552 DNAJC19Q96DA6 116 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 FAM212AQ96EL1 285 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 TSPAN18Q96SJ8 248 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 DDX23Q9BUQ8 820 aaKnown RBP27.4■■□□□ 1.98
U2AF1-201ENST00000291552 STRA6Q9BX79 667 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 BACH2Q9BYV9 841 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 CRISPLD1Q9H336 500 aa27.4■■□□□ 1.98
U2AF1-201ENST00000291552 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.4■■□□□ 1.98
U2AF1-201ENST00000291552 A0A087X0B3 334 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 XPOTO43592 962 aaKnown RBP27.39■■□□□ 1.98
U2AF1-201ENST00000291552 ECI2O75521 394 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 TWF1Q12792 350 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 SNW1Q13573 536 aaKnown RBP27.39■■□□□ 1.98
U2AF1-201ENST00000291552 MLF2Q15773 248 aaPredicted RBP27.39■■□□□ 1.98
U2AF1-201ENST00000291552 TANGO2Q6ICL3 276 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 ZNF720Q7Z2F6 126 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 PJA1Q8NG27 643 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 INTS4Q96HW7 963 aaKnown RBP27.39■■□□□ 1.98
U2AF1-201ENST00000291552 USP28Q96RU2 1077 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 YIPF1Q9Y548 306 aa27.39■■□□□ 1.98
U2AF1-201ENST00000291552 TICRRQ7Z2Z1 1910 aa27.39■■□□□ 1.97
U2AF1-201ENST00000291552 LILRA4P59901 499 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 C9orf57Q5W0N0 161 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 CD302Q8IX05 232 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 KRI1Q8N9T8 703 aaKnown RBP27.38■■□□□ 1.97
U2AF1-201ENST00000291552 FOXD4L1Q9NU39 408 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 MAFFQ9ULX9 164 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 SIT1Q9Y3P8 196 aa27.38■■□□□ 1.97
U2AF1-201ENST00000291552 MORC2Q9Y6X9 1032 aaPredicted RBP27.38■■□□□ 1.97
U2AF1-201ENST00000291552 ZNF292O60281 2723 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 ANO9A1A5B4 782 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 TYMPP19971 482 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 ADSSP30520 456 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 EPHA5P54756 1037 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 KCNA1Q09470 495 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 TMEM132DQ14C87 1099 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 SLC44A4Q53GD3 710 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 ADALQ6DHV7 355 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 CRELD2Q6UXH1 353 aaPredicted RBP27.37■■□□□ 1.97
U2AF1-201ENST00000291552 DSTYKQ6XUX3 929 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 SENP8Q96LD8 212 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 PGLYRP2Q96PD5 576 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 TMEM209Q96SK2 561 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 CCDC39Q9UFE4 941 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 AGO2Q9UKV8 859 aaKnown RBP27.37■■□□□ 1.97
U2AF1-201ENST00000291552 DERAQ9Y315 318 aa27.37■■□□□ 1.97
U2AF1-201ENST00000291552 EP300Q09472 2414 aaPredicted RBP27.37■■□□□ 1.97
U2AF1-201ENST00000291552 PIRO00625 290 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 ABCD1P33897 745 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 FAM78AQ5JUQ0 283 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 RRAGBQ5VZM2 374 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 OVOS1Q6IE37 1185 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 PDZD4Q76G19 769 aaPredicted RBP27.36■■□□□ 1.97
U2AF1-201ENST00000291552 HVCN1Q96D96 273 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 ZSWIM3Q96MP5 696 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 DNAJC25Q9H1X3 360 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 MTF2Q9Y483 593 aaPredicted RBP27.36■■□□□ 1.97
U2AF1-201ENST00000291552 NCANO14594 1321 aa27.36■■□□□ 1.97
U2AF1-201ENST00000291552 OR6C75A6NL08 312 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 MICAL2O94851 1124 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 GPR17Q13304 367 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 SLC39A14Q15043 492 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 USP37Q86T82 979 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 EFCAB13Q8IY85 973 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 TTC9BQ8N6N2 239 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 ZSWIM2Q8NEG5 633 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 ELSPBP1Q96BH3 223 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 LRRC3Q9BY71 257 aa27.35■■□□□ 1.97
U2AF1-201ENST00000291552 OXCT2Q9BYC2 517 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms