RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 GPSM2P81274 684 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 CMTR1Q8N1G2 835 aaKnown RBP15.49■□□□□ 0.07
SEC16A-202ENST00000290037 ANKS1AQ92625 1134 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 ECT2Q9H8V3 914 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 CDYLQ9Y232 598 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 CD2BP2O95400 341 aaKnown RBP15.49■□□□□ 0.07
SEC16A-202ENST00000290037 CYLC2Q14093 348 aaPredicted RBP15.49■□□□□ 0.07
SEC16A-202ENST00000290037 QRICH1Q2TAL8 776 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
SEC16A-202ENST00000290037 ZNF556Q9HAH1 456 aa15.49■□□□□ 0.07
SEC16A-202ENST00000290037 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 SELENONQ9NZV5 590 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TTC7AQ9ULT0 858 aaPredicted RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TTKP33981 857 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 EAPPQ56P03 285 aaPredicted RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 SLC22A9Q8IVM8 553 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 C19orf60Q96EN9 201 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 FAM167BQ9BTA0 163 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 KATNA1O75449 491 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 ARSEP51690 589 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TMTC4Q5T4D3 741 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TTC30AQ86WT1 665 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TTC30BQ8N4P2 665 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 CCT8L2Q96SF2 557 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 HSPBP1Q9NZL4 362 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 F5H6K3 240 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 FKBP6O75344 327 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 KLRC3Q07444 240 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TMEM132DQ14C87 1099 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 SHOC2Q9UQ13 582 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 GDAQ9Y2T3 454 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TRMT5Q32P41 509 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 FAM133BQ5BKY9 247 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 EXD1Q8NHP7 514 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 GMCL1Q96IK5 515 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 STN1Q9H668 368 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 ANKRD6Q9Y2G4 727 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 GDF11O95390 407 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 GSNP06396 782 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 FAM192AQ9GZU8 254 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 TJP2Q9UDY2 1190 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 DPP7Q9UHL4 492 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 RNF103-CHMP3A0A140T963 221 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 CYP27B1O15528 508 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 EPS8Q12929 822 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 FAM83EQ2M2I3 478 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 Q4G0T1 1027 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 MEI1Q5TIA1 1274 aa15.48■□□□□ 0.07
SEC16A-202ENST00000290037 PAPD7Q5XG87 772 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
SEC16A-202ENST00000290037 RBM15Q96T37 977 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■■■■□ 22.4
SEC16A-202ENST00000290037 SAC3D1A6NKF1 404 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 CYBBP04839 570 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 SNRNP35Q16560 246 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ANKRD13CQ8N6S4 541 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 APPL2Q8NEU8 664 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 LRRC39Q96DD0 335 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ACTL7BQ9Y614 415 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ERI2A8K979 691 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 GHRP10912 638 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 MYL4P12829 197 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 GFPT1Q06210 699 aaPredicted RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ZNF235Q14590 738 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 AADATQ8N5Z0 425 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 KRT82Q9NSB4 513 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 HBP1O60381 514 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 TPI1P60174 286 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 PDE1CQ14123 709 aaPredicted RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 VPS72Q15906 364 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 FAM102AQ5T9C2 384 aaPredicted RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 FKBP1CQ5VVH2 108 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ECE2O60344 883 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 IFNA14P01570 189 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 NAA35Q5VZE5 725 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ZBED8Q8IZ13 594 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 NCLNQ969V3 563 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 ERAP1Q9NZ08 941 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 TRAF3IP3Q9Y228 551 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 M0QYV0 167 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 CDK16Q00536 496 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 SLC20A1Q8WUM9 679 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 PARK7Q99497 189 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 CCT8L1PA6NM43 557 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 MYL2P10916 166 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 LSP1P33241 339 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 CDK7P50613 346 aa15.47■□□□□ 0.07
SEC16A-202ENST00000290037 EIF3EP60228 445 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 YTHDF3Q7Z739 585 aaKnown RBP15.47■□□□□ 0.07
SEC16A-202ENST00000290037 MCCC1Q96RQ3 725 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms