RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 PON1P27169 355 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 TRIM71Q2Q1W2 868 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 CEP85LQ5SZL2 805 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 DPY19L2P1Q6NXN4 242 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 NME8Q8N427 588 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 SPATA4Q8NEY3 305 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 TRIM58Q8NG06 486 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 OR5B17Q8NGF7 314 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 N4BP2L2Q92802 583 aaPredicted RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 LSM14BQ9BX40 385 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 NXF3Q9H4D5 531 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 NLRC4Q9NPP4 1024 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 AJAP1Q9UKB5 411 aaPredicted RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 CPSF3Q9UKF6 684 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 ST3GAL5Q9UNP4 418 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 NPTXRO95502 500 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 STAG3L1P0CL83 205 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 CKBP12277 381 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 TNNI1P19237 187 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 CD52P31358 61 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 VAV2P52735 878 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 MGAT3Q09327 533 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 MBTPS1Q14703 1052 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 EXOC3L4Q17RC7 722 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 CCDC13Q8IYE1 715 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 SH2D3CQ8N5H7 860 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 SEMA4DQ92854 862 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 APOL6Q9BWW8 343 aa10.38□□□□□ -0.75
LRTOMT-201ENST00000289488 UMODL1Q5DID0 1318 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 MACROD2A1Z1Q3 448 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 MEIS3P2A8K0S8 358 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 M0QZ92 97 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 AKAP5P24588 427 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 CDK7P50613 346 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 POLR2FP61218 127 aaKnown RBP10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 CDC42EP1Q00587 391 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 MYL7Q01449 175 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 KIF5AQ12840 1032 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 PTK7Q13308 1070 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 NLRP14Q86W24 1093 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 MYCBPAPQ8TBZ2 947 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 TAS1R2Q8TE23 839 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 CRISPLD2Q9H0B8 497 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 ACTR5Q9H9F9 607 aaPredicted RBP10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 SLC40A1Q9NP59 571 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 ZNHIT6Q9NWK9 470 aaKnown RBP10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 TRPV2Q9Y5S1 764 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 CHD7Q9P2D1 2997 aa10.37□□□□□ -0.75
LRTOMT-201ENST00000289488 MAPK13O15264 365 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 TACC1O75410 805 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 NR1D1P20393 614 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 MXI1P50539 228 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 CDR1P51861 262 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 PSMD6Q15008 389 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 RNF187Q5TA31 235 aaPredicted RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 TDRD10Q5VZ19 366 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 CD302Q8IX05 232 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 FAM126BQ8IXS8 530 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 C1orf131Q8NDD1 294 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 LMO3Q8TAP4 145 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 ARMC5Q96C12 935 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 FNBP1Q96RU3 617 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 HINFPQ9BQA5 517 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 NUP58Q9BVL2 599 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 MTMR12Q9C0I1 747 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SIX2Q9NPC8 291 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SNTG2Q9NY99 539 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 HYOU1Q9Y4L1 999 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SCN1AP35498 2009 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 LDHAP00338 332 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 KRT14P02533 472 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 TCP1P17987 556 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 CDK17Q00537 523 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SLC7A5Q01650 507 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 LPIN1Q14693 890 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SLC10A6Q3KNW5 377 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 GLE1Q53GS7 698 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 FBXO47Q5MNV8 452 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 UBXN11Q5T124 520 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 CFAP58Q5T655 872 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 KCTD16Q68DU8 428 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 TWF2Q6IBS0 349 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 C8orf74Q6P047 294 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 NOTUMQ6P988 496 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 SLC27A1Q6PCB7 646 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 TRAF7Q6Q0C0 670 aa10.36□□□□□ -0.75
LRTOMT-201ENST00000289488 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms